RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 DOLKQ9UPQ8 538 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 LRRC42Q9Y546 428 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 MYH7P12883 1935 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 SEMA3EO15041 775 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 FOXD2O60548 495 aaPredicted RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 IMPDH2P12268 514 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 ALADP13716 330 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 GNAT2P19087 354 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 EIF4BP23588 611 aaKnown RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 KRT2P35908 639 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 CCR3P51677 355 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 MRPS35P82673 323 aaKnown RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 PPP2R5CQ13362 524 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 KPNB1Q14974 876 aaKnown RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 CCDC57Q2TAC2 916 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 NAALADL2Q58DX5 795 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 CGB2Q6NT52 195 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 MFSD6Q6ZSS7 791 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 BARGINQ6ZT62 677 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 TRIM50Q86XT4 487 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 SCYL3Q8IZE3 742 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 MREGQ8N565 214 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 SHKBP1Q8TBC3 707 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 C18orf8Q96DM3 657 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 FAM89AQ96GI7 184 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 PRR11Q96HE9 360 aaPredicted RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 HIC2Q96JB3 615 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 LSM14BQ9BX40 385 aaKnown RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 EPB41L4BQ9H329 900 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 FOXP1Q9H334 677 aaPredicted RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 ZNF180Q9UJW8 692 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 ADGRB3O60242 1522 aa7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 XRN1Q8IZH2 1706 aaKnown RBP7.85□□□□□ -1.15
LIMCH1-207ENST00000508466 ANKRD63C9JTQ0 380 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 IFNAR1P17181 557 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 MEI1Q5TIA1 1274 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 ARHGAP27Q6ZUM4 889 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 C3orf67Q6ZVT6 689 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 INTS8Q75QN2 995 aaKnown RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SAPCD2Q86UD0 394 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CPNE8Q86YQ8 564 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 APPBP2Q92624 585 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 MPP4Q96JB8 637 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SRPK1Q96SB4 655 aaKnown RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 VCXQ9H320 206 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 UTP11Q9Y3A2 253 aaKnown RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 NUMBLQ9Y6R0 609 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 ERCC6L2Q5T890 1561 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 ASAP2O43150 1006 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 NPTXRO95502 500 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SETSIPP0DME0 302 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SERPINB3P29508 390 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PLOD1Q02809 727 aaPredicted RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 KLHL30Q0D2K2 578 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PDIA5Q14554 519 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 TSNAXIP1Q2TAA8 658 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 KBTBD12Q3ZCT8 623 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 EMC10Q5UCC4 262 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PDXDC1Q6P996 788 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PEX26Q7Z412 305 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 ZNF654Q8IZM8 581 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 MAGEB6Q8N7X4 407 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 ZNF579Q8NAF0 562 aaKnown RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 TTLL11Q8NHH1 800 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 WDR60Q8WVS4 1066 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 P2RX5Q93086 422 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CLPTM1LQ96KA5 538 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 IFT74Q96LB3 600 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 METTL22Q9BUU2 404 aaPredicted RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 EPB41L4AQ9HCS5 686 aaPredicted RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 KLHL14Q9P2G3 628 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 RBMX2Q9Y388 322 aaKnown RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SPATA31A3Q5VYP0 1347 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CDC42BPGQ6DT37 1551 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CFAP69A5D8W1 941 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 TXNDC9O14530 226 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 IRS4O14654 1257 aaPredicted RBP7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 RASGRF2O14827 1237 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 DNAJC6O75061 913 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 FLOT1O75955 427 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 DEXIO95424 95 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 FOXN2P32314 431 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 STX2P32856 288 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PDE6CP51160 858 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PKN1Q16512 942 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 FAM47AQ5JRC9 791 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 HGSNATQ68CP4 663 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SATL1Q86VE3 508 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CLMNQ96JQ2 1002 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CENPOQ9BU64 300 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 PITPNM3Q9BZ71 974 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 KRT23Q9C075 422 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 CYP39A1Q9NYL5 469 aa7.84□□□□□ -1.15
LIMCH1-207ENST00000508466 SOS2Q07890 1332 aaPredicted RBP7.84□□□□□ -1.16
LIMCH1-207ENST00000508466 KDM6AO15550 1401 aaPredicted RBP7.84□□□□□ -1.16
LIMCH1-207ENST00000508466 MYH2Q9UKX2 1941 aa7.84□□□□□ -1.16
LIMCH1-207ENST00000508466 A0A1W2PQC6 194 aa7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 RNMTO43148 476 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-207ENST00000508466 KLRC4O43908 158 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms