RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 POLBP06746 335 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 LPLP06858 475 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 TMEM253P0C7T8 217 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 COL6A2P12110 1019 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 IFNGR1P15260 489 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ADH6P28332 368 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 NTF4P34130 210 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ASPAP45381 313 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CASP5P51878 434 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CDK17Q00537 523 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 APBA1Q02410 837 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZNF543Q08ER8 600 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 POSTNQ15063 836 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCNG2Q16589 344 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 FSCN1Q16658 493 aaKnown RBP4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 TIGD6Q17RP2 521 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 UVSSAQ2YD98 709 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCDC92Q53HC0 331 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 SLC45A4Q5BKX6 768 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CIAPIN1Q6FI81 312 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 LMBR1LQ6UX01 489 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ARHGAP36Q6ZRI8 547 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 RFX8Q6ZV50 586 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 MAEAQ7L5Y9 396 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 OTOP1Q7RTM1 612 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 MAP4K3Q8IVH8 894 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCDC103Q8IW40 242 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 COLGALT2Q8IYK4 626 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CHCHD4Q8N4Q1 142 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ESX1Q8N693 406 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCDC155Q8N6L0 562 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 DNAJB8Q8NHS0 232 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 KLHDC4Q8TBB5 520 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 TTC9Q92623 222 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 COPS5Q92905 334 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 TNFRSF25Q93038 417 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZNF566Q969W8 418 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 COA7Q96BR5 231 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 TMEM41AQ96HV5 264 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 GMCL1Q96IK5 515 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 JAM3Q9BX67 310 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CYP4F12Q9HCS2 524 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 SH3GLB2Q9NR46 395 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 MRGBPQ9NV56 204 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CLDND1Q9NY35 253 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 CCDC39Q9UFE4 941 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 STAP2Q9UGK3 403 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 TUBD1Q9UJT1 453 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 ITGB1BP2Q9UKP3 347 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 PADI4Q9UM07 663 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 STXBP5LQ9Y2K9 1186 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 NR2E3Q9Y5X4 410 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 NPFFR2Q9Y5X5 522 aa4.24□□□□□ -1.73
HMGB1P22-201ENST00000505315 SSU72P8A0A1W2PR75 194 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 SLC35F4A4IF30 521 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 NEURL1BA8MQ27 555 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 APOL1O14791 398 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 SIGLEC6O43699 453 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 TMEM127O75204 238 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 GSTM1P09488 218 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 PARP1P09874 1014 aaKnown RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 HARSP12081 509 aaKnown RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 MYF5P13349 255 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 YBX3P16989 372 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 PAMP19021 973 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 TPP2P29144 1249 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 CD68P34810 354 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 RAD52P43351 418 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 MTNR1BP49286 362 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 CLNS1AP54105 237 aaKnown RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZBED6P86452 979 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 NMIQ13287 307 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 LAPTM5Q13571 262 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 PMS2P11Q13670 270 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 PLCB4Q15147 1175 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 TAF11Q15544 211 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 DUOXA2Q1HG44 320 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 CPZQ66K79 652 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 APOA5Q6Q788 366 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 FASTKD5Q7L8L6 764 aaKnown RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 TRIM46Q7Z4K8 759 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZSCAN30Q86W11 494 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 HEATR4Q86WZ0 1026 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 COL23A1Q86Y22 540 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 SMYD4Q8IYR2 804 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 C12orf50Q8NA57 414 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 DDX11Q96FC9 970 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 TTC14Q96N46 770 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 RMDN3Q96TC7 470 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 LRFN3Q9BTN0 628 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 SORBS1Q9BX66 1292 aaKnown RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 PRKRIP1Q9H875 184 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 DCP1AQ9NPI6 582 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 ACSS2Q9NR19 701 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 ZNF277Q9NRM2 450 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 DACT1Q9NYF0 836 aa4.23□□□□□ -1.73
HMGB1P22-201ENST00000505315 FBXO10Q9UK96 956 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms