RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 SLITRK3O94933 977 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 GCNT3O95395 438 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 AFPP02771 609 aaKnown RBP16.23■□□□□ 0.19
CHTOP-206ENST00000495554 RSPH10BP0C881 870 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 XRCC5P13010 732 aaKnown RBP16.23■□□□□ 0.19
CHTOP-206ENST00000495554 MUTP22033 750 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 ITIH3Q06033 890 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 DGKZQ13574 1117 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 CEP55Q53EZ4 464 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 PLCB1Q9NQ66 1216 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 SLC16A3O15427 465 aaKnown RBP16.22■□□□□ 0.19
CHTOP-206ENST00000495554 RPS12P25398 132 aaKnown RBP16.22■□□□□ 0.19
CHTOP-206ENST00000495554 CTTNQ14247 550 aaKnown RBP16.22■□□□□ 0.19
CHTOP-206ENST00000495554 SLC18A3Q16572 532 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 MAP9Q49MG5 647 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 ZNF572Q7Z3I7 529 aaPredicted RBP16.22■□□□□ 0.19
CHTOP-206ENST00000495554 TPH2Q8IWU9 490 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 HYOU1Q9Y4L1 999 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 GAS7O60861 476 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 NR3C1P04150 777 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
CHTOP-206ENST00000495554 APBA1Q02410 837 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 CASP8Q14790 479 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 PIGOQ8TEQ8 1089 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 DRC1Q96MC2 740 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 BCAS3Q9H6U6 928 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 SUGCTQ9HAC7 445 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
CHTOP-206ENST00000495554 ASTN1O14525 1302 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 EIF3DO15371 548 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHTOP-206ENST00000495554 AKAP3O75969 853 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 EPB41P11171 864 aaKnown RBP16.21■□□□□ 0.19
CHTOP-206ENST00000495554 KLHL30Q0D2K2 578 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 CCDC70Q6NSX1 233 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 DYDC2Q96IM9 177 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 OSBPL9Q96SU4 736 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 SGIP1Q9BQI5 828 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 ZCCHC17Q9NP64 241 aaKnown RBP16.21■□□□□ 0.19
CHTOP-206ENST00000495554 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
CHTOP-206ENST00000495554 ATAD5Q96QE3 1844 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 CHMP2AO43633 222 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 FAM13AO94988 1023 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 ICAM1P05362 532 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 ARP10275 920 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 TNFAIP1Q13829 316 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 ASIC2Q16515 512 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 EXOC3L4Q17RC7 722 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 C1orf186Q6ZWK4 172 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 FAM133AQ8N9E0 248 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 KIAA1683Q9H0B3 1180 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 COL20A1Q9P218 1284 aa16.21■□□□□ 0.18
CHTOP-206ENST00000495554 CNOT7Q9UIV1 285 aaKnown RBP16.21■□□□□ 0.18
CHTOP-206ENST00000495554 FZD9O00144 591 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 HSD17B4P51659 736 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 TBC1D10BQ4KMP7 808 aaPredicted RBP16.2■□□□□ 0.18
CHTOP-206ENST00000495554 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
CHTOP-206ENST00000495554 COG1Q8WTW3 980 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 CLEC4DQ8WXI8 215 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 PDE11AQ9HCR9 933 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 BZW2Q9Y6E2 419 aaKnown RBP16.2■□□□□ 0.18
CHTOP-206ENST00000495554 CTNND1O60716 968 aaKnown RBP16.2■□□□□ 0.18
CHTOP-206ENST00000495554 UCHL3P15374 230 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 NAP1L1P55209 391 aaKnown RBP16.2■□□□□ 0.18
CHTOP-206ENST00000495554 ARID5AQ03989 594 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 NAB2Q15742 525 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 KLHDC7AQ5VTJ3 777 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 DPY19L2P1Q6NXN4 242 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 B3GNT9Q6UX72 402 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 MMGT1Q8N4V1 131 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 MYCT1Q8N699 235 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 ZNF577Q9BSK1 485 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 ACBD3Q9H3P7 528 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 PARVGQ9HBI0 331 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 POLD4Q9HCU8 107 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 KCND2Q9NZV8 630 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 SEL1LQ9UBV2 794 aa16.2■□□□□ 0.18
CHTOP-206ENST00000495554 A0A087X0T9 212 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 SFI1A8K8P3 1242 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 H3BQF6 201 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 NFIBO00712 420 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 ZBTB39O15060 712 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 WDR46O15213 610 aaKnown RBP16.19■□□□□ 0.18
CHTOP-206ENST00000495554 FAM228BP0C875 321 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 SLC9A1P19634 815 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 PON1P27169 355 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 DCAF17Q5H9S7 520 aaPredicted RBP16.19■□□□□ 0.18
CHTOP-206ENST00000495554 NBPF12Q5TAG4 269 aaPredicted RBP16.19■□□□□ 0.18
CHTOP-206ENST00000495554 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHTOP-206ENST00000495554 ADAMTS1Q9UHI8 967 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 FBXL5Q9UKA1 691 aa16.19■□□□□ 0.18
CHTOP-206ENST00000495554 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms