RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FAM122AQ96E09 287 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 ZNF577Q9BSK1 485 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 ALG13Q9NP73 1137 aaKnown RBP26.39■■□□□ 1.82
COL27A1-208ENST00000494780 LRFN2Q9ULH4 789 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 HCN4Q9Y3Q4 1203 aa26.39■■□□□ 1.82
COL27A1-208ENST00000494780 LOXHD1Q8IVV2 1947 aa26.39■■□□□ 1.81
COL27A1-208ENST00000494780 GNA11P29992 359 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 NFX1Q12986 1120 aaKnown RBP26.38■■□□□ 1.81
COL27A1-208ENST00000494780 PKN1Q16512 942 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 TMEM266Q2M3C6 531 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 ODR4Q5SWX8 454 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 ZNF746Q6NUN9 644 aaPredicted RBP26.38■■□□□ 1.81
COL27A1-208ENST00000494780 BLOC1S2Q6QNY1 142 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 FBXL16Q8N461 479 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 JAKMIP1Q96N16 626 aaKnown RBP26.38■■□□□ 1.81
COL27A1-208ENST00000494780 ERVK-5Q9HDB9 667 aa26.38■■□□□ 1.81
COL27A1-208ENST00000494780 ZBTB42B2RXF5 422 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 RPS6KA5O75582 802 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 ATP4AP20648 1035 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 HSPA4P34932 840 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 SARSP49591 514 aaKnown RBP26.37■■□□□ 1.81
COL27A1-208ENST00000494780 CAMK1Q14012 370 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 SMAP1Q8IYB5 467 aaPredicted RBP26.37■■□□□ 1.81
COL27A1-208ENST00000494780 BBXQ8WY36 941 aaPredicted RBP26.37■■□□□ 1.81
COL27A1-208ENST00000494780 RNF216Q9NWF9 866 aaPredicted RBP26.37■■□□□ 1.81
COL27A1-208ENST00000494780 GINS2Q9Y248 185 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 NOC2LQ9Y3T9 749 aaKnown RBP26.37■■□□□ 1.81
COL27A1-208ENST00000494780 MAFBQ9Y5Q3 323 aaPredicted RBP26.37■■□□□ 1.81
COL27A1-208ENST00000494780 SNX14Q9Y5W7 946 aa26.37■■□□□ 1.81
COL27A1-208ENST00000494780 FAM86C2PA6NEL3 165 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 ADAMTS3O15072 1205 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 ITGB1P05556 798 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 ALADP13716 330 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 PAN2Q504Q3 1202 aaKnown RBP26.36■■□□□ 1.81
COL27A1-208ENST00000494780 CKAP2LQ8IYA6 745 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 SPPL3Q8TCT6 385 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 PPP2R3CQ969Q6 453 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 CDHR5Q9HBB8 845 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 TCEAL9Q9UHQ7 104 aa26.36■■□□□ 1.81
COL27A1-208ENST00000494780 CIITAP33076 1130 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 AKAP17AQ02040 695 aaKnown RBP26.35■■□□□ 1.81
COL27A1-208ENST00000494780 ZP2Q05996 745 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 BICD2Q8TD16 824 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 UIMC1Q96RL1 719 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 AGXT2Q9BYV1 514 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 C1orf112Q9NSG2 853 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 PCDHB7Q9Y5E2 793 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 PCDHA10Q9Y5I2 948 aa26.35■■□□□ 1.81
COL27A1-208ENST00000494780 GPR182O15218 404 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 C22orf31O95567 290 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 PSAPP07602 524 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 RPS6KB1P23443 525 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 DLX2Q07687 328 aaPredicted RBP26.34■■□□□ 1.81
COL27A1-208ENST00000494780 ADHFE1Q8IWW8 467 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 KLHL23Q8NBE8 558 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 TMEM40Q8WWA1 233 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 PHKBQ93100 1093 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 RNF26Q9BY78 433 aaPredicted RBP26.34■■□□□ 1.81
COL27A1-208ENST00000494780 IGFLR1Q9H665 355 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 RGS18Q9NS28 235 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 ST3GAL5Q9UNP4 418 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 KIAA1671Q9BY89 1806 aa26.34■■□□□ 1.81
COL27A1-208ENST00000494780 DENND3A2RUS2 1198 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 C19orf67A6NJJ6 358 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 MGEA5O60502 916 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 CSPG5O95196 566 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 DNAJB1P25685 340 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 GTF2F1P35269 517 aaKnown RBP eCLIP26.33■■□□□ 1.81
COL27A1-208ENST00000494780 GATMP50440 423 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 CRYBB1P53674 252 aaPredicted RBP26.33■■□□□ 1.81
COL27A1-208ENST00000494780 ADAM15Q13444 863 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 SMAD2Q15796 467 aaKnown RBP26.33■■□□□ 1.81
COL27A1-208ENST00000494780 NTRK3Q16288 839 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 PRR16Q569H4 304 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 SLC24A5Q71RS6 500 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 CCDC148Q8NFR7 591 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 POF1BQ8WVV4 589 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 ADAM2Q99965 735 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 CEP131Q9UPN4 1083 aa26.33■■□□□ 1.81
COL27A1-208ENST00000494780 PRR33A8MZF0 331 aa26.32■■□□□ 1.8
COL27A1-208ENST00000494780 MBTPS2O43462 519 aa26.32■■□□□ 1.8
COL27A1-208ENST00000494780 PSMA5P28066 241 aa26.32■■□□□ 1.8
COL27A1-208ENST00000494780 KIZQ2M2Z5 673 aa26.32■■□□□ 1.8
COL27A1-208ENST00000494780 GABBR1Q9UBS5 961 aa26.32■■□□□ 1.8
COL27A1-208ENST00000494780 C9IYK1 514 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 MAGEB2O15479 319 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 TBX10O75333 385 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 IFNAR1P17181 557 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 IBSPP21815 317 aaPredicted RBP26.31■■□□□ 1.8
COL27A1-208ENST00000494780 SMAD4Q13485 552 aaKnown RBP26.31■■□□□ 1.8
COL27A1-208ENST00000494780 CLUL1Q15846 466 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 METTL13Q8N6R0 699 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 RASGRP4Q8TDF6 673 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 LENG9Q96B70 501 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 FAM167AQ96KS9 214 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 OSMRQ99650 979 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 CD207Q9UJ71 328 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 EVPLQ92817 2033 aa26.31■■□□□ 1.8
COL27A1-208ENST00000494780 MYH9P35579 1960 aaKnown RBP26.3■■□□□ 1.8
COL27A1-208ENST00000494780 LINC01565O15544 149 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms