RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PLCG1P19174 1290 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 CDK7P50613 346 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 RTP1P59025 263 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 SNX17Q15036 470 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 TRIM60Q495X7 471 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 C1orf53Q5VUE5 145 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 RRAGBQ5VZM2 374 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
BRCA1-223ENST00000494123 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 HTATIP2Q9BUP3 242 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 CYP26B1Q9NR63 512 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 TUBE1Q9UJT0 475 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
BRCA1-223ENST00000494123 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 E9PMD0 336 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 CMA1P23946 247 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 NPEPPSP55786 919 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 TBC1D8BQ0IIM8 1120 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 CCDC73Q6ZRK6 1079 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 PDILTQ8N807 584 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 PANK2Q9BZ23 570 aa16.24■□□□□ 0.19
BRCA1-223ENST00000494123 TRMT13Q9NUP7 481 aaKnown RBP16.24■□□□□ 0.19
BRCA1-223ENST00000494123 DBR1Q9UK59 544 aaKnown RBP16.24■□□□□ 0.19
BRCA1-223ENST00000494123 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TREHO43280 583 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 B4GALT4O60513 344 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 STAT6P42226 847 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 POLGP54098 1239 aaPredicted RBP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 ZNF200P98182 395 aaPredicted RBP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TLE2Q04725 743 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 MTHFD1LQ6UB35 978 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 CLEC17AQ6ZS10 378 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 ANKRD33Q7Z3H0 272 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 FAM126BQ8IXS8 530 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 MRPS27Q92552 414 aaKnown RBP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TRPV6Q9H1D0 765 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 BHMT2Q9H2M3 363 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 PPME1Q9Y570 386 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TRIP12Q14669 1992 aaPredicted RBP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 ZBTB42B2RXF5 422 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 MAGEB2O15479 319 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 CAPN15O75808 1086 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 EYA4O95677 639 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 SSBP05455 408 aaKnown RBP eCLIP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 KLRC1P26715 233 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 HOXC8P31273 242 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 RARRES1P49788 294 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 HIC1Q14526 733 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TARBP2Q15633 366 aaKnown RBP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 MARCH8Q5T0T0 291 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 EXOC8Q8IYI6 725 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TMEM87AQ8NBN3 555 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 RETREG2Q8NC44 543 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 SLC7A3Q8WY07 619 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 TOX2Q96NM4 488 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
BRCA1-223ENST00000494123 STK17AQ9UEE5 414 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
BRCA1-223ENST00000494123 C22orf31O95567 290 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 CYP2C9P11712 490 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 PFKFB1P16118 471 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 RFC5P40937 340 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 METTL13Q8N6R0 699 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
BRCA1-223ENST00000494123 RAD54LQ92698 747 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 DHX58Q96C10 678 aa16.22■□□□□ 0.19
BRCA1-223ENST00000494123 JPH2Q9BR39 696 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-223ENST00000494123 BMP2KQ9NSY1 1161 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-223ENST00000494123 MBLAC1A4D2B0 266 aaPredicted RBP16.21■□□□□ 0.19
BRCA1-223ENST00000494123 POLR2DO15514 142 aaKnown RBP16.21■□□□□ 0.19
BRCA1-223ENST00000494123 USO1O60763 962 aaKnown RBP16.21■□□□□ 0.19
BRCA1-223ENST00000494123 PRPF40AO75400 957 aaKnown RBP16.21■□□□□ 0.19
BRCA1-223ENST00000494123 DGAT1O75907 488 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 PLA2G4BP0C869 781 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 ADAM17P78536 824 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 DHX8Q14562 1220 aaKnown RBP16.21■□□□□ 0.19
BRCA1-223ENST00000494123 TAF2Q6P1X5 1199 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 ZBTB10Q96DT7 871 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 SUGCTQ9HAC7 445 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 ATP6V0A4Q9HBG4 840 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.19
BRCA1-223ENST00000494123 A0A087X0B3 334 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 MAFO75444 373 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-223ENST00000494123 CD4P01730 458 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 TMOD1P28289 359 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 PTK7Q13308 1070 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 EMC2Q15006 297 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 EFCAB12Q6NXP0 572 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 PADI6Q6TGC4 694 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 SERINC5Q86VE9 423 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms