RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	SUGCT	Q9HAC7	445 aa		21.23	■□□□□ 0.99
ABCA2-222	ENST00000494046	THEG	Q9P2T0	379 aa		21.23	■□□□□ 0.99
ABCA2-222	ENST00000494046	USP11	P51784	963 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	ERVK-21	P61565	698 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	KRT76	Q01546	638 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	TSHZ1	Q6ZSZ6	1077 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	GABBR1	Q9UBS5	961 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	PCDHA10	Q9Y5I2	948 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	TRPV2	Q9Y5S1	764 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	XIRP2	A4UGR9	3374 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	SMIM35	A0A1B0GVV1	85 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046		M0QZ92	97 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046		M0R2N6	131 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	CHMP2A	O43633	222 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	PFKFB2	O60825	505 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	TDP2	O95551	362 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	PSAP	P07602	524 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	POU3F3	P20264	500 aa	Predicted RBP	21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	SMAP1	Q8IYB5	467 aa	Predicted RBP	21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	GJB4	Q9NTQ9	266 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	SMC3	Q9UQE7	1217 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	GINS2	Q9Y248	185 aa		21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	MAFB	Q9Y5Q3	323 aa	Predicted RBP	21.22	■□□□□ 0.99
ABCA2-222	ENST00000494046	ZBTB42	B2RXF5	422 aa		21.21	■□□□□ 0.99
ABCA2-222	ENST00000494046	ENPP3	O14638	875 aa		21.21	■□□□□ 0.99
ABCA2-222	ENST00000494046	LARGE1	O95461	756 aa		21.21	■□□□□ 0.99
ABCA2-222	ENST00000494046	SP7	Q8TDD2	431 aa	Predicted RBP	21.21	■□□□□ 0.99
ABCA2-222	ENST00000494046	CELF4	Q9BZC1	486 aa	Known RBP	21.21	■□□□□ 0.99
ABCA2-222	ENST00000494046	GZF1	Q9H116	711 aa	Predicted RBP	21.21	■□□□□ 0.99
ABCA2-222	ENST00000494046	CDKL5	O76039	1030 aa		21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	TJAP1	Q5JTD0	557 aa		21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	ZNF484	Q5JVG2	852 aa		21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	NECAB1	Q8N987	351 aa		21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	DAGLB	Q8NCG7	672 aa		21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	PPP1R16B	Q96T49	567 aa		21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	COL4A4	P53420	1690 aa	Predicted RBP	21.2	■□□□□ 0.98
ABCA2-222	ENST00000494046	WDR64	B1ANS9	1081 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	GAS7	O60861	476 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	CTDNEP1	O95476	244 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	RPLP2	P05387	115 aa	Known RBP	21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	TMEM266	Q2M3C6	531 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	KLHL40	Q2TBA0	621 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	L1TD1	Q5T7N2	865 aa	Known RBP	21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	LRCH2	Q5VUJ6	765 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	CCDC83	Q8IWF9	413 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	KIAA0319L	Q8IZA0	1049 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	ATXN2L	Q8WWM7	1075 aa	Known RBP	21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	LINC01599	Q8WXQ3	324 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	BBX	Q8WY36	941 aa	Predicted RBP	21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	SLC5A5	Q92911	643 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	UNC45A	Q9H3U1	944 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	CDHR5	Q9HBB8	845 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	DISC1	Q9NRI5	854 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	LMBRD1	Q9NUN5	540 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	PADI3	Q9ULW8	664 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	COL1A2	P08123	1366 aa		21.19	■□□□□ 0.98
ABCA2-222	ENST00000494046	TFF2	Q03403	129 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	ME3	Q16798	604 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	INF2	Q27J81	1249 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	NME8	Q8N427	588 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	FBXO22	Q8NEZ5	403 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	TEKT3	Q9BXF9	490 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	TSPYL2	Q9H2G4	693 aa	Predicted RBP	21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	IGSF9B	Q9UPX0	1349 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	C22orf31	O95567	290 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	PAK2	Q13177	524 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	NONO	Q15233	471 aa	Known RBP eCLIP	21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	UGCG	Q16739	394 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046		Q4G0T1	1027 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	GALNT17	Q6IS24	598 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	RTN4RL1	Q86UN2	441 aa	Predicted RBP	21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	METTL13	Q8N6R0	699 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	ASB2	Q96Q27	587 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	RIT2	Q99578	217 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	PHF20	Q9BVI0	1012 aa		21.18	■□□□□ 0.98
ABCA2-222	ENST00000494046	STK36	Q9NRP7	1315 aa		21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	ZNF862	O60290	1169 aa		21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	IBSP	P21815	317 aa	Predicted RBP	21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	MRPS5	P82675	430 aa	Known RBP	21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	EPC2	Q52LR7	807 aa		21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	FOXD4L5	Q5VV16	416 aa	Predicted RBP	21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	OXER1	Q8TDS5	423 aa		21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	ORC3	Q9UBD5	711 aa	Predicted RBP	21.17	■□□□□ 0.98
ABCA2-222	ENST00000494046	CYP3A7-CYP3A51P	A0A087WV96	503 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	PSMD10	O75832	226 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	CYP3A7	P24462	503 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	NFX1	Q12986	1120 aa	Known RBP	21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	LETM2	Q2VYF4	491 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	KRT25	Q7Z3Z0	450 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	TMEM40	Q8WWA1	233 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	SYMPK	Q92797	1274 aa	Known RBP	21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	SQOR	Q9Y6N5	450 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	KDM3A	Q9Y4C1	1321 aa		21.16	■□□□□ 0.98
ABCA2-222	ENST00000494046	GOLGA6L3	A6NEY3	463 aa		21.15	■□□□□ 0.98
ABCA2-222	ENST00000494046	SLC37A4	O43826	429 aa		21.15	■□□□□ 0.98
ABCA2-222	ENST00000494046	VTN	P04004	478 aa		21.15	■□□□□ 0.98
ABCA2-222	ENST00000494046	CLCN3	P51790	818 aa		21.15	■□□□□ 0.98
ABCA2-222	ENST00000494046	PRKCE	Q02156	737 aa		21.15	■□□□□ 0.98
ABCA2-222	ENST00000494046	KIZ	Q2M2Z5	673 aa		21.15	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms