RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 RBL2Q08999 1139 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 HIC1Q14526 733 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 TARBP2Q15633 366 aaKnown RBP17.84■□□□□ 0.45
HDAC7-224ENST00000488927 MTHFD1LQ6UB35 978 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 RPAINQ86UA6 219 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 CDK5RAP3Q96JB5 506 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 CEP170P1Q96L14 293 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 CTAGE1Q96RT6 745 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 HIPK3Q9H422 1215 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 CYP26B1Q9NR63 512 aa17.84■□□□□ 0.45
HDAC7-224ENST00000488927 MYH9P35579 1960 aaKnown RBP17.83■□□□□ 0.44
HDAC7-224ENST00000488927 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 TRIM43BA6NCK2 446 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 TIMP1P01033 207 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 RAG1P15918 1043 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 TMOD1P28289 359 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 RFC5P40937 340 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 MTERF2Q49AM1 385 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 HYIQ5T013 277 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 CABP7Q86V35 215 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 NME8Q8N427 588 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.44
HDAC7-224ENST00000488927 TRIM43Q96BQ3 446 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-224ENST00000488927 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.44
HDAC7-224ENST00000488927 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 DBR1Q9UK59 544 aaKnown RBP17.83■□□□□ 0.44
HDAC7-224ENST00000488927 RCOR1Q9UKL0 485 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 KIAA1024Q9UPX6 916 aa17.83■□□□□ 0.44
HDAC7-224ENST00000488927 MYH15Q9Y2K3 1946 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 PP2D1A8MPX8 630 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 GAS2O43903 313 aaKnown RBP17.82■□□□□ 0.44
HDAC7-224ENST00000488927 CUTAO60888 179 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 PARNO95453 639 aaKnown RBP17.82■□□□□ 0.44
HDAC7-224ENST00000488927 C22orf31O95567 290 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 POTEGQ6S5H5 508 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 SH3RF1Q7Z6J0 888 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 TRAPPC12Q8WVT3 735 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 SLC7A3Q8WY07 619 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 SPATA32Q96LK8 384 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 MMTAG2Q9BU76 263 aaKnown RBP17.82■□□□□ 0.44
HDAC7-224ENST00000488927 CCSER1Q9C0I3 900 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 DNM3Q9UQ16 869 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 ALPK3Q96L96 1907 aa17.82■□□□□ 0.44
HDAC7-224ENST00000488927 MAFO75444 373 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-224ENST00000488927 CDC25AP30304 524 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 ME1P48163 572 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 DNM2P50570 870 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 GRIN1Q05586 938 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 PLA2G4FQ68DD2 849 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 RASSF8Q8NHQ8 419 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 DHX38Q92620 1227 aaKnown RBP17.81■□□□□ 0.44
HDAC7-224ENST00000488927 LBHD1Q9BQE6 289 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-224ENST00000488927 DDX19AQ9NUU7 478 aaKnown RBP17.81■□□□□ 0.44
HDAC7-224ENST00000488927 CCDC39Q9UFE4 941 aa17.81■□□□□ 0.44
HDAC7-224ENST00000488927 ZMYND8Q9ULU4 1186 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-224ENST00000488927 DGAT1O75907 488 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 CKBP12277 381 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 SELPP16109 830 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 THPOP40225 353 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 RARRES1P49788 294 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 POLGP54098 1239 aaPredicted RBP17.8■□□□□ 0.44
HDAC7-224ENST00000488927 CDC42EP1Q00587 391 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 ZRSR1Q15695 479 aaKnown RBP17.8■□□□□ 0.44
HDAC7-224ENST00000488927 TRIM71Q2Q1W2 868 aaKnown RBP17.8■□□□□ 0.44
HDAC7-224ENST00000488927 IER5Q5VY09 327 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 MFSD5Q6N075 450 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 EFCAB12Q6NXP0 572 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 RUFY4Q6ZNE9 571 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 TMEM199Q8N511 208 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 LEO1Q8WVC0 666 aaPredicted RBP17.8■□□□□ 0.44
HDAC7-224ENST00000488927 SYMPKQ92797 1274 aaKnown RBP17.8■□□□□ 0.44
HDAC7-224ENST00000488927 CLIC6Q96NY7 704 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 CEP89Q96ST8 783 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 MAP7D2Q96T17 732 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 PPP1R12CQ9BZL4 782 aa17.8■□□□□ 0.44
HDAC7-224ENST00000488927 IGKV6-21A0A0C4DH24 114 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 TMEM150BA6NC51 233 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 M0QZ92 97 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 EYA4O95677 639 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 SYN1P17600 705 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 RFC2P35250 354 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 NPEPPSP55786 919 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 ECM1Q16610 540 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 LRRC8DQ7L1W4 858 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 DNAJB3Q8WWF6 145 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 FAM49AQ9H0Q0 323 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-224ENST00000488927 DHX33Q9H6R0 707 aaKnown RBP17.79■□□□□ 0.44
HDAC7-224ENST00000488927 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 KAT6AQ92794 2004 aa17.79■□□□□ 0.44
HDAC7-224ENST00000488927 WDR81Q562E7 1941 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 ARHGEF35A5YM69 484 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 RSPH10B2B2RC85 870 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 H0YGN5 161 aa17.78■□□□□ 0.44
HDAC7-224ENST00000488927 ZBTB39O15060 712 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms