RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 H3BNC9 293 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 TDP2O95551 362 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 C22orf31O95567 290 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 NFX1Q12986 1120 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 GPM6BQ13491 265 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 LRCH2Q5VUJ6 765 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 GALNT17Q6IS24 598 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 DAGLBQ8NCG7 672 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 UHRF1Q96T88 793 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 TMX1Q9H3N1 280 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 UNC45AQ9H3U1 944 aa13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 NOC2LQ9Y3T9 749 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-215ENST00000488920 CYP3A7-CYP3A51PA0A087WV96 503 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 ZNF862O60290 1169 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 PFKFB2O60825 505 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 DGKIO75912 1065 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 CDKL5O76039 1030 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 VTNP04004 478 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 CYP3A7P24462 503 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 CTNNB1P35222 781 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 AK2P54819 239 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 ANAPC15P60006 121 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 BTG3Q14201 252 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 NONOQ15233 471 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 UGCGQ16739 394 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 PTPROQ16827 1216 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 INF2Q27J81 1249 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 KIZQ2M2Z5 673 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 Q4G0T1 1027 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 TMEM40Q8WWA1 233 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 ZNF689Q96CS4 500 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 MRPL38Q96DV4 380 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 NRBP2Q9NSY0 501 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 GJB4Q9NTQ9 266 aa13.48□□□□□ -0.25
CCHCR1-215ENST00000488920 KAT6AQ92794 2004 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 ADGRA3Q8IWK6 1321 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 MGEA5O60502 916 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 RPS6KA5O75582 802 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 PSMD10O75832 226 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 CTDNEP1O95476 244 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 OATP04181 439 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 SFNP31947 248 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 BMPR1AP36894 532 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 CLCN3P51790 818 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 EFCAB12Q6NXP0 572 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 NPAS4Q8IUM7 802 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 CRIPAKQ8N1N5 446 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 NECAB1Q8N987 351 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 FAM167AQ96KS9 214 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 OSMRQ99650 979 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 DDX25Q9UHL0 483 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 ST3GAL5Q9UNP4 418 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 CEP131Q9UPN4 1083 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 MICAL3Q7RTP6 2002 aa13.47□□□□□ -0.25
CCHCR1-215ENST00000488920 TTC28Q96AY4 2481 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 MAGEB2O15479 319 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 GPR32O75388 356 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 SEC24BO95487 1268 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 LINC00271P0C7V0 271 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 STAG3L1P0CL83 205 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 GATMP50440 423 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 JAK3P52333 1124 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 PRKCEQ02156 737 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 LETM2Q2VYF4 491 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 PAN2Q504Q3 1202 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 LRRC71Q8N4P6 559 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 ETNPPLQ8TBG4 499 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 CLP1Q92989 425 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 MBOAT7Q96N66 472 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 ADAM2Q99965 735 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 ORC3Q9UBD5 711 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 LRFN2Q9ULH4 789 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 AKT3Q9Y243 479 aa13.46□□□□□ -0.25
CCHCR1-215ENST00000488920 STK36Q9NRP7 1315 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 CCDC194A0A1B0GVG4 234 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 GPR182O15218 404 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 GRM6O15303 877 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 SLC37A4O43826 429 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 RB1P06400 928 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 XBP1P17861 261 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 TMOD1P28289 359 aa13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-215ENST00000488920 ME3Q16798 604 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms