RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TCF7P36402 384 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 NFX1Q12986 1120 aaKnown RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 SLC35G1Q2M3R5 365 aa17.63■□□□□ 0.41
U2AF1-211ENST00000486519 VARS2Q5ST30 1063 aaKnown RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
U2AF1-211ENST00000486519 MRPL43Q8N983 215 aaKnown RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 PNMA1Q8ND90 353 aa17.63■□□□□ 0.41
U2AF1-211ENST00000486519 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 DOCK8Q8NF50 2099 aa17.63■□□□□ 0.41
U2AF1-211ENST00000486519 NEDD4P46934 1319 aa17.63■□□□□ 0.41
U2AF1-211ENST00000486519 FAM208BQ5VWN6 2430 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 C9IYK1 514 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 FGAP02671 866 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 LAG3P18627 525 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 NEDD9Q14511 834 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 KCNT2Q6UVM3 1135 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 C1orf210Q8IVY1 113 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 PI4K2BQ8TCG2 481 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 TMEM40Q8WWA1 233 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 ADAM2Q99965 735 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 PARD6AQ9NPB6 346 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 NCDNQ9UBB6 729 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 CDV3Q9UKY7 258 aaKnown RBP17.62■□□□□ 0.41
U2AF1-211ENST00000486519 PCDHA1Q9Y5I3 950 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 FRYQ5TBA9 3013 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 EVPLQ92817 2033 aa17.62■□□□□ 0.41
U2AF1-211ENST00000486519 PKD1L2Q7Z442 2459 aa17.61■□□□□ 0.41
U2AF1-211ENST00000486519 TBC1D8BQ0IIM8 1120 aa17.61■□□□□ 0.41
U2AF1-211ENST00000486519 ALX1Q15699 326 aa17.61■□□□□ 0.41
U2AF1-211ENST00000486519 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
U2AF1-211ENST00000486519 ZC3H14Q6PJT7 736 aaKnown RBP17.61■□□□□ 0.41
U2AF1-211ENST00000486519 AMNQ9BXJ7 453 aa17.61■□□□□ 0.41
U2AF1-211ENST00000486519 CELF4Q9BZC1 486 aaKnown RBP17.61■□□□□ 0.41
U2AF1-211ENST00000486519 PUF60Q9UHX1 559 aaKnown RBP17.61■□□□□ 0.41
U2AF1-211ENST00000486519 NOC2LQ9Y3T9 749 aaKnown RBP17.61■□□□□ 0.41
U2AF1-211ENST00000486519 SQORQ9Y6N5 450 aa17.61■□□□□ 0.41
U2AF1-211ENST00000486519 ASPMQ8IZT6 3477 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 ATP9AO75110 1047 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 INSRRP14616 1297 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 SMC1AQ14683 1233 aaKnown RBP17.6■□□□□ 0.41
U2AF1-211ENST00000486519 IER5Q5VY09 327 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 XRRA1Q6P2D8 792 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 SLC22A17Q8WUG5 538 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 CASD1Q96PB1 797 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 PCYT2Q99447 389 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 FOXQ1Q9C009 403 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 RGS18Q9NS28 235 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 WNT16Q9UBV4 365 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 FRMPD4Q14CM0 1322 aa17.6■□□□□ 0.41
U2AF1-211ENST00000486519 FIBPO43427 364 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 KINO60870 393 aaKnown RBP17.59■□□□□ 0.41
U2AF1-211ENST00000486519 CA8P35219 290 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 ACAP1Q15027 740 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 PPM1JQ5JR12 505 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 MIER1Q8N108 512 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 ST13P5Q8NFI4 369 aaPredicted RBP17.59■□□□□ 0.41
U2AF1-211ENST00000486519 COL26A1Q96A83 441 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 MTMR8Q96EF0 704 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 SPEGQ15772 3267 aa17.59■□□□□ 0.41
U2AF1-211ENST00000486519 NT5C1B-RDH14C9J2C7 533 aa17.58■□□□□ 0.4
U2AF1-211ENST00000486519 GNPTABQ3T906 1256 aa17.58■□□□□ 0.4
U2AF1-211ENST00000486519 ASPRV1Q53RT3 343 aa17.58■□□□□ 0.4
U2AF1-211ENST00000486519 ZNF558Q96NG5 402 aa17.58■□□□□ 0.4
U2AF1-211ENST00000486519 RTKNQ9BST9 563 aa17.58■□□□□ 0.4
U2AF1-211ENST00000486519 FASNP49327 2511 aaKnown RBP17.58■□□□□ 0.4
U2AF1-211ENST00000486519 GCOM1H8Y6P7 765 aaPredicted RBP17.57■□□□□ 0.4
U2AF1-211ENST00000486519 POLR2MP0CAP2 368 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 RFX1P22670 979 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 SLC24A5Q71RS6 500 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 TMEM173Q86WV6 379 aaPredicted RBP17.57■□□□□ 0.4
U2AF1-211ENST00000486519 SLC39A11Q8N1S5 342 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
U2AF1-211ENST00000486519 PPP1R16BQ96T49 567 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 ERAP1Q9NZ08 941 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 SPG21Q9NZD8 308 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 GINS2Q9Y248 185 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 SIT1Q9Y3P8 196 aa17.57■□□□□ 0.4
U2AF1-211ENST00000486519 KDM3AQ9Y4C1 1321 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 DENND3A2RUS2 1198 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 CXCL14O95715 111 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 PARP1P09874 1014 aaKnown RBP17.56■□□□□ 0.4
U2AF1-211ENST00000486519 KCNA2P16389 499 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 FAM189BP81408 668 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 KRT76Q01546 638 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 PLCB4Q15147 1175 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 CCDC149Q6ZUS6 474 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 OTOP3Q7RTS5 596 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 GPR149Q86SP6 731 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 ZNF589Q86UQ0 364 aaPredicted RBP17.56■□□□□ 0.4
U2AF1-211ENST00000486519 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 FAM227BQ96M60 508 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 ATP6V0A4Q9HBG4 840 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 SH2B1Q9NRF2 756 aaPredicted RBP17.56■□□□□ 0.4
U2AF1-211ENST00000486519 DZANK1Q9NVP4 752 aa17.56■□□□□ 0.4
U2AF1-211ENST00000486519 MAP3K20Q9NYL2 800 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms