RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 KSR2Q6VAB6 950 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 PTCHD1Q96NR3 888 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 NUP88Q99567 741 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-211ENST00000484581 BDH2Q9BUT1 245 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 CHST12Q9NRB3 414 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 H2AFY2Q9P0M6 372 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-211ENST00000484581 PPARGC1AQ9UBK2 798 aaKnown RBP5.84□□□□□ -1.47
VPS13A-211ENST00000484581 CBLCQ9ULV8 474 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 PMF1-BGLAPU3KQ54 211 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 TRIM75PA6NK02 468 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 ZNF561-AS1K7EIQ3 104 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 TGM5O43548 720 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 NCAM1P13591 858 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 VCAM1P19320 739 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 CYP2C19P33261 490 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 CORO7P57737 925 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 RPL11P62913 178 aaKnown RBP5.83□□□□□ -1.48
VPS13A-211ENST00000484581 PHC1P78364 1004 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 PCBP2Q15366 365 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS13A-211ENST00000484581 VPS72Q15906 364 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 SPATS1Q496A3 300 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 LONRF3Q496Y0 759 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 GPR158Q5T848 1215 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 PNMA8AQ86V59 439 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-211ENST00000484581 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 NLGN2Q8NFZ4 835 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 FAXDC2Q96IV6 333 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 RNF38Q9H0F5 515 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 FBXL7Q9UJT9 491 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 SPO11Q9Y5K1 396 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 TIMM13Q9Y5L4 95 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-211ENST00000484581 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
VPS13A-211ENST00000484581 ADAMTS20P59510 1910 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 SLC12A8A0AV02 714 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 ERC2O15083 957 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 CREB3O43889 395 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 LDHAP00338 332 aaKnown RBP5.82□□□□□ -1.48
VPS13A-211ENST00000484581 TRIM27P14373 513 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 ATF2P15336 505 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 GTF2H3Q13889 308 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 GBX1Q14549 363 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 RTP5Q14D33 572 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 TERF2Q15554 542 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 UBXN11Q5T124 520 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 BROXQ5VW32 411 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 TSHZ1Q6ZSZ6 1077 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 CABP7Q86V35 215 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 CMTR2Q8IYT2 770 aaKnown RBP5.82□□□□□ -1.48
VPS13A-211ENST00000484581 Q8N1Y9 231 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 FNIP1Q8TF40 1166 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 ZNF526Q8TF50 670 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-211ENST00000484581 ALG3Q92685 438 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 AIFM3Q96NN9 605 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 CDIP1Q9H305 208 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 CATSPERZQ9NTU4 200 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 MRFAP1Q9Y605 127 aa5.82□□□□□ -1.48
VPS13A-211ENST00000484581 H7BY64 318 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 PRICKLE3O43900 615 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-211ENST00000484581 LSP1P33241 339 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 IRF9Q00978 393 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 SAFB2Q14151 953 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS13A-211ENST00000484581 LRRC32Q14392 662 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 ZNF174Q15697 407 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 GPR19Q15760 415 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 ZFYVE27Q5T4F4 411 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 NT5DC1Q5TFE4 455 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 HHIPL2Q6UWX4 724 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 LIPIQ6XZB0 460 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 NLRP10Q86W26 655 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 RASSF3Q86WH2 238 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 CPNE8Q86YQ8 564 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 ADGRG2Q8IZP9 1017 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 USP33Q8TEY7 942 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 CLIP3Q96DZ5 547 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 CHAMP1Q96JM3 812 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 SMURF1Q9HCE7 757 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 MKS1Q9NXB0 559 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 CLDND1Q9NY35 253 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 ZNF652Q9Y2D9 606 aa5.81□□□□□ -1.48
VPS13A-211ENST00000484581 A0A1B0GTL3 188 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 C7orf72A4D263 438 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 NPHS1O60500 1241 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 KRT37O76014 449 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 LTFP02788 710 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 ZBTB48P10074 688 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-211ENST00000484581 PDE6AP16499 860 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 LPOP22079 712 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-211ENST00000484581 FBLN1P23142 703 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 BCL6P41182 706 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 ZXDCQ2QGD7 858 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-211ENST00000484581 VWA3BQ502W6 1294 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 PGM2L1Q6PCE3 622 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 EPM2AIP1Q7L775 607 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-211ENST00000484581 KIAA1958Q8N8K9 716 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 ZNF610Q8N9Z0 462 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 HSPBAP1Q96EW2 488 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 SPATA25Q9BR10 227 aa5.8□□□□□ -1.48
VPS13A-211ENST00000484581 SARGQ9BW04 601 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms