RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 MOXD1Q6UVY6 613 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 METTL13Q8N6R0 699 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 MAFAQ8NHW3 353 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 ETNPPLQ8TBG4 499 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 PPM1EQ8WY54 764 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 TNFRSF25Q93038 417 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 ZSCAN31Q96LW9 406 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 IFIH1Q9BYX4 1025 aaKnown RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 AGO3Q9H9G7 860 aaKnown RBP9.33□□□□□ -0.92
HDAC6-221ENST00000477561 BRMS1Q9HCU9 246 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 GBF1Q92538 1859 aa9.33□□□□□ -0.92
HDAC6-221ENST00000477561 KAT6AQ92794 2004 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-221ENST00000477561 TMEM150BA6NC51 233 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 M0QZ92 97 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 EML1O00423 815 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 WNT7AO00755 349 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 EFCAB14O75071 495 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 GJB5O95377 273 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 C22orf31O95567 290 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 AMHP03971 560 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 OATP04181 439 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 ATP2B1P20020 1258 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 CD52P31358 61 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 SFNP31947 248 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 JAK3P52333 1124 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 PRKCEQ02156 737 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 TAP1Q03518 808 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 IER5Q5VY09 327 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 PPP4R3AQ6IN85 833 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 KIAA0319LQ8IZA0 1049 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 SLC17A8Q8NDX2 589 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 ARNTL2Q8WYA1 636 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-221ENST00000477561 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 CELF4Q9BZC1 486 aaKnown RBP9.32□□□□□ -0.92
HDAC6-221ENST00000477561 CDHR5Q9HBB8 845 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 KCNMB3Q9NPA1 279 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 NRBP2Q9NSY0 501 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 MTUS1Q9ULD2 1270 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 TRPV2Q9Y5S1 764 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 COL1A2P08123 1366 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 EYSQ5T1H1 3165 aa9.32□□□□□ -0.92
HDAC6-221ENST00000477561 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 PTPRSQ13332 1948 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 EPOPA6NHQ4 379 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 ENPP3O14638 875 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 CD2BP2O95400 341 aaKnown RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 VTNP04004 478 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 GCFC2P16383 781 aaKnown RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 CLCN3P51790 818 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 CCDC85BQ15834 202 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 KIZQ2M2Z5 673 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 TMEM266Q2M3C6 531 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 MTERF2Q49AM1 385 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 EFCAB12Q6NXP0 572 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 B3GNT9Q6UX72 402 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 MICALL1Q8N3F8 863 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 NME8Q8N427 588 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 LRRC71Q8N4P6 559 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 HAS1Q92839 578 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 APBB2Q92870 758 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 C8orf76Q96K31 380 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 ZNF668Q96K58 619 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 FAM167AQ96KS9 214 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 RAD9AQ99638 391 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 LLPHQ9BRT6 129 aaKnown RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 SUGCTQ9HAC7 445 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 SH2B1Q9NRF2 756 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-221ENST00000477561 VAV3Q9UKW4 847 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 PADI3Q9ULW8 664 aa9.31□□□□□ -0.92
HDAC6-221ENST00000477561 DDX11L8A8MPP1 907 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 STBD1O95210 358 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 BAG4O95429 457 aaKnown RBP9.3□□□□□ -0.92
HDAC6-221ENST00000477561 RPLP2P05387 115 aaKnown RBP9.3□□□□□ -0.92
HDAC6-221ENST00000477561 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
HDAC6-221ENST00000477561 PAK2Q13177 524 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 SAFBQ15424 915 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC6-221ENST00000477561 NCAPH2Q6IBW4 605 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 RTN4RL1Q86UN2 441 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-221ENST00000477561 USP38Q8NB14 1042 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 RDM1Q8NG50 284 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 TMEM40Q8WWA1 233 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 TOP1MTQ969P6 601 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 FAM20AQ96MK3 541 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 OSMRQ99650 979 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 NAP1L4Q99733 375 aaKnown RBP9.3□□□□□ -0.92
HDAC6-221ENST00000477561 RGL1Q9NZL6 768 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 AKT3Q9Y243 479 aa9.3□□□□□ -0.92
HDAC6-221ENST00000477561 NOC2LQ9Y3T9 749 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms