RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FAM26EQ8N5C1 309 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 HIPK4Q8NE63 616 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 ALG3Q92685 438 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 RELTQ969Z4 430 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 MAML3Q96JK9 1138 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 FOXB1Q99853 325 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 MYL10Q9BUA6 226 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 ANO3Q9BYT9 981 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 SLC52A1Q9NWF4 448 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 UCKL1Q9NWZ5 548 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 NOB1Q9ULX3 412 aaKnown RBP7.92□□□□□ -1.14
VPS50-212ENST00000476413 PRSS38A1L453 326 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 ZNF839A8K0R7 811 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 HRKO00198 91 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 SNUPNO95149 360 aaKnown RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 ASGR2P07307 311 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 PTGS1P23219 599 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 VIPR1P32241 457 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 ZNF200P98182 395 aaPredicted RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 SRSF2Q01130 221 aaKnown RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 PITRM1Q5JRX3 1037 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 TTC38Q5R3I4 469 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 UNQ6494/PRO21346Q6UXR6 183 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 TMC6Q7Z403 805 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 TPH2Q8IWU9 490 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 MAGEB6Q8N7X4 407 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 TTC8Q8TAM2 541 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 JADE3Q92613 823 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 EAF2Q96CJ1 260 aaPredicted RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 ZNF552Q9H707 407 aaPredicted RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 SLC39A2Q9NP94 309 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 ZNF277Q9NRM2 450 aaPredicted RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 GEMIN8Q9NWZ8 242 aaKnown RBP7.91□□□□□ -1.14
VPS50-212ENST00000476413 GABBR1Q9UBS5 961 aa7.91□□□□□ -1.14
VPS50-212ENST00000476413 IRS2Q9Y4H2 1338 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 ABLIM1O14639 778 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 PRPF6O94906 941 aaKnown RBP7.9□□□□□ -1.14
VPS50-212ENST00000476413 PAPLNO95428 1278 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 C8BP07358 591 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 CCND1P24385 295 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 RGS3P49796 1198 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 SLC6A3Q01959 620 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 TMEM62Q0P6H9 643 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 LRSAM1Q6UWE0 723 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 PNMA8AQ86V59 439 aaPredicted RBP7.9□□□□□ -1.14
VPS50-212ENST00000476413 ZSWIM9Q86XI8 627 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 CPA5Q8WXQ8 436 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 TEKT5Q96M29 485 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 TUBGCP5Q96RT8 1024 aa7.9□□□□□ -1.14
VPS50-212ENST00000476413 KLHL33A6NCF5 533 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 PF4V1P10720 104 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 AGXTP21549 392 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 PFKPQ01813 784 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 MLC1Q15049 377 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 TOR2AQ5JU69 321 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 CCDC62Q6P9F0 684 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 SLC41A1Q8IVJ1 513 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 DNAJC28Q9NX36 388 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 GIT1Q9Y2X7 761 aa7.89□□□□□ -1.15
VPS50-212ENST00000476413 ZNF503-AS2A6NEH8 195 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 XPOTO43592 962 aaKnown RBP7.88□□□□□ -1.15
VPS50-212ENST00000476413 TRIM25Q14258 630 aaKnown RBP7.88□□□□□ -1.15
VPS50-212ENST00000476413 KCNMB1Q16558 191 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS50-212ENST00000476413 SLFN12LQ6IEE8 588 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 CXorf57Q6NSI4 855 aaKnown RBP7.88□□□□□ -1.15
VPS50-212ENST00000476413 KIAA1841Q6NSI8 718 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 AMOTL1Q8IY63 956 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 E2F7Q96AV8 911 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 QRSL1Q9H0R6 528 aaKnown RBP7.88□□□□□ -1.15
VPS50-212ENST00000476413 INCENPQ9NQS7 918 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 ARHGAP28Q9P2N2 729 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 PNMA8BQ9ULN7 279 aaPredicted RBP7.88□□□□□ -1.15
VPS50-212ENST00000476413 EDARQ9UNE0 448 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 ANKRD6Q9Y2G4 727 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 GPR45Q9Y5Y3 372 aa7.88□□□□□ -1.15
VPS50-212ENST00000476413 CCDC194A0A1B0GVG4 234 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 PRC1O43663 620 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 LPLP06858 475 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 PFKMP08237 780 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 ENO2P09104 434 aaPredicted RBP7.87□□□□□ -1.15
VPS50-212ENST00000476413 ITGB5P18084 799 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 ATF3P18847 181 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 GNALP38405 381 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 MC3RP41968 323 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 CACNB2Q08289 660 aaPredicted RBP7.87□□□□□ -1.15
VPS50-212ENST00000476413 TCIRG1Q13488 830 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 CLUL1Q15846 466 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 UGT8Q16880 541 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 PRAMEF9Q5VWM5 478 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 TTLL7Q6ZT98 887 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 DTX3Q8N9I9 347 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 IGDCC4Q8TDY8 1250 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 WNT8AQ9H1J5 351 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 ZFP64Q9NPA5 681 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 GALNT8Q9NY28 637 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 INVSQ9Y283 1065 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 MRFAP1Q9Y605 127 aa7.87□□□□□ -1.15
VPS50-212ENST00000476413 SCO2A0A1W2PP80 73 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms