RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CCHCR1Q8TD31 782 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 KCNMB3Q9NPA1 279 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 AGPAT5Q9NUQ2 364 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 SLC12A4Q9UP95 1085 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 TRIM37O94972 964 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 DYMQ7RTS9 669 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 NT5C3AQ9H0P0 336 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 MLXIPQ9HAP2 919 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 PAPOLBQ9NRJ5 636 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 VPS54Q9P1Q0 977 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 CCNT1O60563 726 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 HSPA6P17066 643 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 NTRK3Q16288 839 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 TBC1D1Q86TI0 1168 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 OR2W6PQ8NHA6 318 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 GIMAP4Q9NUV9 329 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MYBL1P10243 752 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ATF2P15336 505 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 PCYT1AP49585 367 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 KPNA2P52292 529 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MFN1Q8IWA4 741 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 STAMQ92783 540 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 TUBB6Q9BUF5 446 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ANO3Q9BYT9 981 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 SLIT1O75093 1534 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 CCT8L1PA6NM43 557 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 EIF4E1BA6NMX2 242 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 FGAP02671 866 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 PAEPP09466 180 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 UHMK1Q8TAS1 419 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 DACH2Q96NX9 599 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 TTC1Q99614 292 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 FAM167BQ9BTA0 163 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 NCK2O43639 380 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MOCS3O95396 460 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ALADP13716 330 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 PDE6AP16499 860 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ATP4AP20648 1035 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 DRD4P21917 467 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 IFNAR2P48551 515 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 LAMB3Q13751 1172 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ZC3H12BQ5HYM0 836 aaKnown RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 TRIM74Q86UV6 250 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 TRIM73Q86UV7 250 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 IRF2BP1Q8IU81 584 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 KLHL23Q8NBE8 558 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 CASKIN2Q8WXE0 1202 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 NR1H4Q96RI1 486 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 KIFC3Q9BVG8 833 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 LMCD1Q9NZU5 365 aa12.37□□□□□ -0.43
U2AF1-209ENST00000475639 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
U2AF1-209ENST00000475639 GNAT1P11488 350 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 AOC3Q16853 763 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
U2AF1-209ENST00000475639 EZH1Q92800 747 aaPredicted RBP12.36□□□□□ -0.43
U2AF1-209ENST00000475639 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 METP08581 1390 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 MBD4O95243 580 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 SLC1A4P43007 532 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 ATG16L1Q676U5 607 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 TMCO5AQ8N6Q1 288 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 FBXL13Q8NEE6 735 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 SMYD2Q9NRG4 433 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 RWDD2AQ9UIY3 292 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 H0YGN5 161 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 ROR2Q01974 943 aaKnown RBP12.36□□□□□ -0.43
U2AF1-209ENST00000475639 DEPTORQ8TB45 409 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 GIPC2Q8TF65 315 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 SATB2Q9UPW6 733 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 NFS1Q9Y697 457 aa12.36□□□□□ -0.43
U2AF1-209ENST00000475639 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 GSTA4O15217 222 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms