RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 MTMR9Q96QG7 549 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 TMEM60Q9H2L4 133 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 PCDHB6Q9Y5E3 794 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 IGKV6D-21A0A0A0MT36 114 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 HAS3O00219 553 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 F2P00734 622 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 ZNF286BP0CG31 522 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 ERVK-21P61565 698 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 UTP14CQ5TAP6 766 aaKnown RBP21.53■■□□□ 1.04
USP11-205ENST00000467378 SLFN12Q8IYM2 578 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 CCDC155Q8N6L0 562 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 C4orf32Q8N8J7 132 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 PCYT2Q99447 389 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 UNC45AQ9H3U1 944 aa21.53■■□□□ 1.04
USP11-205ENST00000467378 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.53■■□□□ 1.04
USP11-205ENST00000467378 ZNF318Q5VUA4 2279 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 KAT6AQ92794 2004 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 GRXCR2A6NFK2 248 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 LGR5O75473 907 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 BAG4O95429 457 aaKnown RBP21.52■■□□□ 1.04
USP11-205ENST00000467378 PSEN2P49810 448 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 PTPN11Q06124 597 aaPredicted RBP21.52■■□□□ 1.04
USP11-205ENST00000467378 CALCRLQ16602 461 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 SMAP1Q8IYB5 467 aaPredicted RBP21.52■■□□□ 1.04
USP11-205ENST00000467378 VAV3Q9UKW4 847 aa21.52■■□□□ 1.04
USP11-205ENST00000467378 LINC01553A4QN01 128 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 H3BRB1 525 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 MARCH6O60337 910 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 MFSD10Q14728 455 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 PUS10Q3MIT2 529 aaKnown RBP21.51■■□□□ 1.03
USP11-205ENST00000467378 FAM117BQ6P1L5 589 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 RAD9AQ99638 391 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 KATNAL1Q9BW62 490 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 ZSCAN16Q9H4T2 348 aaPredicted RBP21.51■■□□□ 1.03
USP11-205ENST00000467378 TUT1Q9H6E5 874 aaKnown RBP21.51■■□□□ 1.03
USP11-205ENST00000467378 PCDHA10Q9Y5I2 948 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 EMSYQ7Z589 1322 aa21.51■■□□□ 1.03
USP11-205ENST00000467378 GJB5O95377 273 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 SPIRE1Q08AE8 756 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 PPP2R5CQ13362 524 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 PKP1Q13835 747 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 PTGISQ16647 500 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 KIAA0753Q2KHM9 967 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 MIS18BP1Q6P0N0 1132 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 CNKSR3Q6P9H4 555 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 TRIM50Q86XT4 487 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 CAGE1Q8TC20 777 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 AFAP1L1Q8TED9 768 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 SMARCAD1Q9H4L7 1026 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 DISC1Q9NRI5 854 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 TCEAL9Q9UHQ7 104 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 PCDHA12Q9UN75 941 aa21.5■■□□□ 1.03
USP11-205ENST00000467378 WDR64B1ANS9 1081 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 H3BQ06 376 aaPredicted RBP21.49■■□□□ 1.03
USP11-205ENST00000467378 CHMP2AO43633 222 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 ZSCAN22P10073 491 aaPredicted RBP21.49■■□□□ 1.03
USP11-205ENST00000467378 SFNP31947 248 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 TXKP42681 527 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 STAT5BP51692 787 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 PTGDRQ13258 359 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 SWSAP1Q6NVH7 229 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 PLPPR4Q7Z2D5 763 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 MIER3Q7Z3K6 550 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 CCDC60Q8IWA6 550 aaPredicted RBP21.49■■□□□ 1.03
USP11-205ENST00000467378 FBXO22Q8NEZ5 403 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 RDM1Q8NG50 284 aa21.49■■□□□ 1.03
USP11-205ENST00000467378 TTC12Q9H892 705 aaPredicted RBP21.49■■□□□ 1.03
USP11-205ENST00000467378 NLRC5Q86WI3 1866 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 POTEB3A0JP26 581 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 EML1O00423 815 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 PSAPP07602 524 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 OR52Z1P0C646 297 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 JAK3P52333 1124 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 FAM173BQ6P4H8 233 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 POTEBQ6S5H4 581 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 EP400NLQ6ZTU2 488 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 LRRC8DQ7L1W4 858 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 SESTD1Q86VW0 696 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 GLG1Q92896 1179 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 RNPEPQ9H4A4 650 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 AZI2Q9H6S1 392 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 ZNF215Q9UL58 517 aaPredicted RBP21.48■■□□□ 1.03
USP11-205ENST00000467378 SAMM50Q9Y512 469 aa21.48■■□□□ 1.03
USP11-205ENST00000467378 MICAL3Q7RTP6 2002 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 SELPP16109 830 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 GPNMBQ14956 572 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 NEK9Q8TD19 979 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 ZNF302Q9NR11 478 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 ERAP1Q9NZ08 941 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 HDAC6Q9UBN7 1215 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 ZDHHC9Q9Y397 364 aa21.47■■□□□ 1.03
USP11-205ENST00000467378 MAFBQ9Y5Q3 323 aaPredicted RBP21.47■■□□□ 1.03
USP11-205ENST00000467378 ABHD14A-ACY1A0A1B0GW23 586 aa21.46■■□□□ 1.03
USP11-205ENST00000467378 LAD1O00515 517 aa21.46■■□□□ 1.03
USP11-205ENST00000467378 BACH1O14867 736 aa21.46■■□□□ 1.03
USP11-205ENST00000467378 F13A1P00488 732 aa21.46■■□□□ 1.03
USP11-205ENST00000467378 ATP4AP20648 1035 aa21.46■■□□□ 1.03
USP11-205ENST00000467378 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
USP11-205ENST00000467378 ATP2C1P98194 919 aaPredicted RBP21.46■■□□□ 1.03
USP11-205ENST00000467378 FAM160B1Q5W0V3 765 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms