RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RIC8BQ9NVN3 520 aa2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 USP36Q9P275 1121 aaKnown RBP2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 DBR1Q9UK59 544 aaKnown RBP2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 TMPRSS11EQ9UL52 423 aa2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 SMG5Q9UPR3 1016 aaKnown RBP2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 THRAP3Q9Y2W1 955 aaKnown RBP2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 SPEF1Q9Y4P9 236 aa2.66□□□□□ -1.98
NUCKS1-202ENST00000464938 TRIM75PA6NK02 468 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 ETV2O00321 342 aaPredicted RBP2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 ELL2O00472 640 aaPredicted RBP2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 GABRDO14764 452 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 KATNA1O75449 491 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 KRT37O76014 449 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 IL18BPO95998 194 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 ENO2P09104 434 aaPredicted RBP2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 RBP3P10745 1247 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 CD40P25942 277 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 EPHB3P54753 998 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 ITGA1P56199 1179 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 DLG4P78352 724 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 NKX3-2P78367 333 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 KRT85P78386 507 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 TMPRSS15P98073 1019 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 FOXO4P98177 505 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 ALDH6A1Q02252 535 aaKnown RBP2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 ADAM9Q13443 819 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 RTP5Q14D33 572 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 TMEM132BQ14DG7 1078 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 DDB1Q16531 1140 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 PRR31Q5SQ13 230 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 SYDE2Q5VT97 1194 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 MPZL3Q6UWV2 235 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 EP400NLQ6ZTU2 488 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 FRMD7Q6ZUT3 714 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 LYSMD2Q8IV50 215 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 SLC41A1Q8IVJ1 513 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 CNTD1Q8N815 330 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 MAML3Q96JK9 1138 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 DIRC2Q96SL1 478 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 SYT3Q9BQG1 590 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 GORASP1Q9BQQ3 440 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 SLC13A1Q9BZW2 595 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 CCDC8Q9H0W5 538 aaPredicted RBP2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 SEMA4AQ9H3S1 761 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 MS4A5Q9H3V2 200 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 TOMM22Q9NS69 142 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 SIRT5Q9NXA8 310 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 GALNT8Q9NY28 637 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 RTEL1Q9NZ71 1219 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 RBPJLQ9UBG7 517 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 TNKSO95271 1327 aa2.65□□□□□ -1.99
NUCKS1-202ENST00000464938 LCHNA4D1U4 455 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 PRAMEF25A6NGN4 478 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 FBXO21O94952 628 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 PRLP01236 227 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 CHGBP05060 677 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 HMGB1P09429 215 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 CYP2C8P10632 490 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 COL6A1P12109 1028 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 SYN1P17600 705 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 PFKLP17858 780 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 PTGS1P23219 599 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 MC4RP32245 332 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 MC3RP41968 323 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 GPR3P46089 330 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 MANFP55145 182 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 NCKAP1LP55160 1127 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 DLX2Q07687 328 aaPredicted RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 KLF1Q13351 362 aaPredicted RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 FAM50AQ14320 339 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 MYBPC3Q14896 1274 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 KANK2Q63ZY3 851 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 IQSEC1Q6DN90 963 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 CD300LDQ6UXZ3 194 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 CXXC5Q7LFL8 322 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 ZC3H18Q86VM9 953 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 CMIPQ8IY22 773 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 KYQ8NBH2 561 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 SMARCC2Q8TAQ2 1214 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 RTF1Q92541 710 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 E2F7Q96AV8 911 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 AHCYL2Q96HN2 611 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 NOX5Q96PH1 765 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 CAMKK2Q96RR4 588 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 TMEM209Q96SK2 561 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 C11orf84Q9BUA3 381 aaPredicted RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 BTBD2Q9BX70 525 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 SGPP1Q9BX95 441 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 HAPLN2Q9GZV7 340 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 WNT8AQ9H1J5 351 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 PCIF1Q9H4Z3 704 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 METTL14Q9HCE5 456 aaKnown RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 TCF7L1Q9HCS4 588 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 SLC39A2Q9NP94 309 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 DLL4Q9NR61 685 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 ZNF277Q9NRM2 450 aaPredicted RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 KCND1Q9NSA2 647 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 SPATA6Q9NWH7 488 aaPredicted RBP2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 TRHDEQ9UKU6 1024 aa2.64□□□□□ -1.99
NUCKS1-202ENST00000464938 DENND2AQ9ULE3 1009 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms