RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 CUTAO60888 179 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 DGAT1O75907 488 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 LYPLA2O95372 231 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 TIMP1P01033 207 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 CD4P01730 458 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 KLRC1P26715 233 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 MARCKSP29966 332 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 THPOP40225 353 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 RFC5P40937 340 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 DNM1Q05193 864 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 FAAP100Q0VG06 881 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 PKP1Q13835 747 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 ODR4Q5SWX8 454 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 CCDC73Q6ZRK6 1079 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 CABP7Q86V35 215 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 SERINC5Q86VE9 423 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 RPUSD2Q8IZ73 545 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 NME8Q8N427 588 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 C4orf32Q8N8J7 132 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 LINC00301Q8NCQ3 95 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 SCLT1Q96NL6 688 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 IPO9Q96P70 1041 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 HSD17B14Q9BPX1 270 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 NIFKQ9BYG3 293 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 PPP1R12CQ9BZL4 782 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 TRPV6Q9H1D0 765 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 MTIF3Q9H2K0 278 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 SUGCTQ9HAC7 445 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 PDLIM7Q9NR12 457 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 CYP26B1Q9NR63 512 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 FAM13BQ9NYF5 915 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 RGL1Q9NZL6 768 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 PCDHA2Q9Y5H9 948 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
SF3B1-206ENST00000462613 SIP14410 1827 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 SMIM35A0A1B0GVV1 85 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 MBLAC1A4D2B0 266 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-206ENST00000462613 TREHO43280 583 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 ZNF862O60290 1169 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 SLITRK3O94933 977 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 PFKMP08237 780 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 ACTN1P12814 892 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 HOXC8P31273 242 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 RFC2P35250 354 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 PPIGQ13427 754 aaKnown RBP eCLIP7.11□□□□□ -1.271e-23■□□□□ 10.6
SF3B1-206ENST00000462613 PTPAQ15257 358 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 UGCGQ16739 394 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 EFCAB12Q6NXP0 572 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 POTEGQ6S5H5 508 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 MTHFD1LQ6UB35 978 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 CATSPER3Q86XQ3 398 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 ZNF579Q8NAF0 562 aaKnown RBP7.11□□□□□ -1.27
SF3B1-206ENST00000462613 MCPH1Q8NEM0 835 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 MTRQ99707 1265 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 CCSER1Q9C0I3 900 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 FAM49AQ9H0Q0 323 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-206ENST00000462613 ATP6V0A4Q9HBG4 840 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 DDX19AQ9NUU7 478 aaKnown RBP7.11□□□□□ -1.27
SF3B1-206ENST00000462613 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 KCNG1Q9UIX4 513 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 DBR1Q9UK59 544 aaKnown RBP7.11□□□□□ -1.27
SF3B1-206ENST00000462613 TBX21Q9UL17 535 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 ZMYND8Q9ULU4 1186 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-206ENST00000462613 KIAA1024Q9UPX6 916 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 AKT3Q9Y243 479 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 TELO2Q9Y4R8 837 aa7.11□□□□□ -1.27
SF3B1-206ENST00000462613 CEP290O15078 2479 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 DNAH12Q6ZR08 3092 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RSPH10B2B2RC85 870 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 ASAP2O43150 1006 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 MAFO75444 373 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 MED24O75448 989 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 C22orf31O95567 290 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 SSBP05455 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 KRT18P05783 430 aaKnown RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RSPH10BP0C881 870 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 CKBP12277 381 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 SELPP16109 830 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 SYN1P17600 705 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 ATP4AP20648 1035 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RARRES1P49788 294 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 ADAM17P78536 824 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 FPGSQ05932 587 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RBL2Q08999 1139 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 TFDP1Q14186 410 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 MXD4Q14582 209 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 EMC2Q15006 297 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PPP2R5AQ15172 486 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RRAGBQ5VZM2 374 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PLA2G4FQ68DD2 849 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 MFSD5Q6N075 450 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PSRC1Q6PGN9 363 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 FAM43BQ6ZT52 329 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 ANO5Q75V66 913 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 LRRC8DQ7L1W4 858 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RPAINQ86UA6 219 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms