RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 SLC32A1Q9H598 525 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 SFXN1Q9H9B4 322 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 RNF146Q9NTX7 359 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 IFT57Q9NWB7 429 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 CYP39A1Q9NYL5 469 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 DKK4Q9UBT3 224 aa8.68□□□□□ -1.02
SSXP3-201ENST00000442971 MYH15Q9Y2K3 1946 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 NF1P21359 2839 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 USP9YO00507 2555 aaPredicted RBP8.67□□□□□ -1.02
SSXP3-201ENST00000442971 ANHXE9PGG2 379 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 STAG3L1P0CL83 205 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 EEF2P13639 858 aaKnown RBP8.67□□□□□ -1.02
SSXP3-201ENST00000442971 PDE4AP27815 886 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 HTR4Q13639 388 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 DGKDQ16760 1214 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 STAMQ92783 540 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 ATP6V0A1Q93050 837 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 KIFC2Q96AC6 838 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 ARID3AQ99856 593 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 TMEM9BQ9NQ34 198 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 NUMBLQ9Y6R0 609 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 LOXHD1Q8IVV2 1947 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 SALL3Q9BXA9 1300 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 AHCTF1Q8WYP5 2266 aa8.67□□□□□ -1.02
SSXP3-201ENST00000442971 UTP20O75691 2785 aaKnown RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 LNP1A1A4G5 178 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 F2P00734 622 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 GHRP10912 638 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 CXCL12P48061 93 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 SATB1Q01826 763 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 HEATR6Q6AI08 1181 aaKnown RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 C15orf39Q6ZRI6 1047 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 ST13P5Q8NFI4 369 aaPredicted RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 GLG1Q92896 1179 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 LIN37Q96GY3 246 aaPredicted RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 FCRL3Q96P31 734 aaPredicted RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 IER2Q9BTL4 223 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 PCGF6Q9BYE7 350 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 ADD3Q9UEY8 706 aaKnown RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 MRPS17Q9Y2R5 130 aaKnown RBP8.66□□□□□ -1.02
SSXP3-201ENST00000442971 MGAQ8IWI9 3026 aa8.66□□□□□ -1.02
SSXP3-201ENST00000442971 TEX51A0A1B0GUA7 166 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 ALDH1L1O75891 902 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 ARIH2O95376 493 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 LAMP2P13473 410 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 AKR1B1P15121 316 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 CA8P35219 290 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 TIMM10P62072 90 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 LY6DQ14210 128 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 ZNF423Q2M1K9 1284 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 UAP1L1Q3KQV9 507 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 ZNF852Q6ZMS4 543 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 TPRG1Q6ZUI0 275 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 CACNA2D4Q7Z3S7 1137 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 SLC22A17Q8WUG5 538 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 LINC01599Q8WXQ3 324 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 RPP25Q9BUL9 199 aaKnown RBP8.65□□□□□ -1.02
SSXP3-201ENST00000442971 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
SSXP3-201ENST00000442971 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.02
SSXP3-201ENST00000442971 NAV3Q8IVL0 2385 aa8.65□□□□□ -1.03
SSXP3-201ENST00000442971 FNDC1Q4ZHG4 1894 aaPredicted RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 LRBAP50851 2863 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 LOC102724159A0A0B4J2E5 919 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 C17orf102A2RUQ5 167 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 CDX4O14627 284 aaPredicted RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 POLR3DP05423 398 aaPredicted RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 ZNF286BP0CG31 522 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 PFKPQ01813 784 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 KRT17Q04695 432 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 ARHGAP1Q07960 439 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 PWP2Q15269 919 aaKnown RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 CHST3Q7LGC8 479 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 RTN4RL1Q86UN2 441 aaPredicted RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 KBTBD6Q86V97 674 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 EHMT1Q9H9B1 1298 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 WDR6Q9NNW5 1121 aaKnown RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 TYW1Q9NV66 732 aaKnown RBP8.64□□□□□ -1.03
SSXP3-201ENST00000442971 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 DNMT3LQ9UJW3 386 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 MYH8P13535 1937 aa8.64□□□□□ -1.03
SSXP3-201ENST00000442971 CXCL14O95715 111 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 GH1P01241 217 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
SSXP3-201ENST00000442971 C6P13671 934 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 LAG3P18627 525 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 ITPKBP27987 946 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 TRIM26Q12899 539 aaPredicted RBP8.63□□□□□ -1.03
SSXP3-201ENST00000442971 LPIN1Q14693 890 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 MVPQ14764 893 aaKnown RBP8.63□□□□□ -1.03
SSXP3-201ENST00000442971 TKFCQ3LXA3 575 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 TAF1BQ53T94 588 aaPredicted RBP8.63□□□□□ -1.03
SSXP3-201ENST00000442971 NSMFQ6X4W1 530 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
SSXP3-201ENST00000442971 CCDC146Q8IYE0 955 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms