RNA–Protein interactions for RNA: ENST00000442921.6

PTPRO-203, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-203ENST00000442921 EPS15L1Q9UBC2 864 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 SPEF2Q9C093 1822 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 LAMB4A4D0S4 1761 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 RGPD5Q99666 1765 aa5.67□□□□□ -1.5
PTPRO-203ENST00000442921 PARP4Q9UKK3 1724 aaKnown RBP5.67□□□□□ -1.5
PTPRO-203ENST00000442921 ENO4A6NNW6 628 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 M0QX08 132 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 IFRD1O00458 451 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 GJB2P29033 226 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 UBXN2AP68543 259 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TNIP1Q15025 636 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PPP2R5BQ15173 497 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZYXQ15942 572 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CREB3L3Q68CJ9 461 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PSAPL1Q6NUJ1 521 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 IRGCQ6NXR0 463 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 OLFML1Q6UWY5 402 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CHPFQ8IZ52 775 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 LILRB2Q8N423 598 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TRIM58Q8NG06 486 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 APPBP2Q92624 585 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZNF75CPQ92670 426 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 USP6NLQ92738 828 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RBM41Q96IZ5 413 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RHOVQ96L33 236 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KCNF1Q9H3M0 494 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PDRG1Q9NUG6 133 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TLR7Q9NYK1 1049 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CLIC5Q9NZA1 410 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 FAM184BQ9ULE4 1060 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CYP46A1Q9Y6A2 500 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ARFGEF2Q9Y6D5 1785 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PKD1L3Q7Z443 1732 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 A0A1W2PRQ8 180 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PDE2AO00408 941 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CHUKO15111 745 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZEB2O60315 1214 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 DIAPH2O60879 1101 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ATP6V1G1O75348 118 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZNF189O75820 626 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HSPA1AP0DMV8 641 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HSPA1BP0DMV9 641 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 BCRP11274 1271 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CASTP20810 708 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 MATR3P43243 847 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 MAGEA10P43363 369 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 VPS72Q15906 364 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC38Q502W7 563 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SMUG1Q53HV7 270 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PPFIBP1Q86W92 1011 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 LINS1Q8NG48 757 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PPP1R14CQ8TAE6 165 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KLHDC4Q8TBB5 520 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KRT82Q9NSB4 513 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TPCN1Q9ULQ1 816 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 AFDNP55196 1824 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC163A0A0D9SF12 145 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SLC35F4A4IF30 521 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SMAD7O15105 426 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SPTLC2O15270 562 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RNMTO43148 476 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KCNQ3O43525 872 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 DNAJA2O60884 412 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RNASEH2AO75792 299 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CTSBP07858 339 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SFTPCP11686 197 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HCLS1P14317 486 aaPredicted RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KCNA6P17658 529 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 RRM1P23921 792 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KIF5BP33176 963 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 SIK1P57059 783 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 NXNQ6DKJ4 435 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TLDC1Q6P9B6 456 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CWC27Q6UX04 472 aaKnown RBP5.66□□□□□ -1.5
PTPRO-203ENST00000442921 XKR5Q6UX68 686 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 ZNF804AQ7Z570 1209 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TTC6Q86TZ1 520 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 WDR66Q8TBY9 1149 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC114Q96M63 670 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 NEK1Q96PY6 1258 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 TRAF3IP3Q9Y228 551 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 KIF1AQ12756 1690 aa5.66□□□□□ -1.5
PTPRO-203ENST00000442921 NUP188Q5SRE5 1749 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 CCDC162PA2VCL2 907 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 GOLGA6L4A6NEF3 574 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 GOLGA6L9A6NEM1 432 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 FGFR1OPO95684 399 aaKnown RBP5.65□□□□□ -1.5
PTPRO-203ENST00000442921 PDCP20941 246 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 GCKP35557 465 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 TOB2Q14106 344 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-203ENST00000442921 INPP5AQ14642 412 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 ANKRD1Q15327 319 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 LRRC23Q53EV4 343 aaPredicted RBP5.65□□□□□ -1.5
PTPRO-203ENST00000442921 LRP10Q7Z4F1 713 aa5.65□□□□□ -1.5
PTPRO-203ENST00000442921 VN1R5Q7Z5H4 357 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms