RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 BANK1Q8NDB2 785 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 CLEC4DQ8WXI8 215 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 PNKPQ96T60 521 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 LXNQ9BS40 222 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 POLD4Q9HCU8 107 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 MAP3K20Q9NYL2 800 aaKnown RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 TCEAL9Q9UHQ7 104 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 JRKLQ9Y4A0 524 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 CAPN6Q9Y6Q1 641 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 DUSP10Q9Y6W6 482 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 FLOT1O75955 427 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 AKAP3O75969 853 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 TCP1P17987 556 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 GUCY2CP25092 1073 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 PSMC2P35998 433 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 USP14P54578 494 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 RASSF7Q02833 373 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 ARID5AQ03989 594 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 GPS2Q13227 327 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 KLHDC7AQ5VTJ3 777 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 HDXQ7Z353 690 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 SYCP3Q8IZU3 236 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 RNF10Q8N5U6 811 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 NOA1Q8NC60 698 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 GOLGA5Q8TBA6 731 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 HNRNPLLQ8WVV9 542 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 AS3MTQ9HBK9 375 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 HOMER2Q9NSB8 354 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 AIPL1Q9NZN9 384 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 COL20A1Q9P218 1284 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 SCAF8Q9UPN6 1271 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 SAMM50Q9Y512 469 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 UBIAD1Q9Y5Z9 338 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
CPNE1-218ENST00000439806 WDR81Q562E7 1941 aa11.43□□□□□ -0.58
CPNE1-218ENST00000439806 ZMYM2Q9UBW7 1377 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 K7ENM7 598 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ZBTB39O15060 712 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 TGFB1I1O43294 461 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 TLR2O60603 784 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 HIP1RO75146 1068 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 P4HBP07237 508 aaKnown RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 FDX1P10109 184 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 MYCLP12524 364 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ACTN1P12814 892 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 PRLRP16471 622 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ITGB5P18084 799 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 SLC9A1P19634 815 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 PON1P27169 355 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 CASP4P49662 377 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 GMPSP49915 693 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ZNF131P52739 623 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 APBA1Q02410 837 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 GHRHRQ02643 423 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 DMTNQ08495 405 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ALCAMQ13740 583 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 SLC18A3Q16572 532 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 TKFCQ3LXA3 575 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 MAP9Q49MG5 647 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ZC2HC1CQ53FD0 456 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 MUM1L1Q5H9M0 696 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 CCDC181Q5TID7 509 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 B3GNT9Q6UX72 402 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 VPS36Q86VN1 386 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 MICALL2Q8IY33 904 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 SYTL5Q8TDW5 730 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 TEPSINQ96N21 525 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 FUT8Q9BYC5 575 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 ACBD3Q9H3P7 528 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 RPAP3Q9H6T3 665 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 AGO4Q9HCK5 861 aaKnown RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 KCNH7Q9NS40 1196 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-218ENST00000439806 GCNT4Q9P109 453 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 PPP1R9AQ9ULJ8 1098 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
CPNE1-218ENST00000439806 KIAA1217Q5T5P2 1943 aa11.41□□□□□ -0.58
CPNE1-218ENST00000439806 GTPBP10A4D1E9 387 aaKnown RBP11.41□□□□□ -0.58
CPNE1-218ENST00000439806 NFKBIEO00221 500 aa11.41□□□□□ -0.58
CPNE1-218ENST00000439806 BUB1O43683 1085 aa11.41□□□□□ -0.58
CPNE1-218ENST00000439806 UCHL3P15374 230 aa11.41□□□□□ -0.58
CPNE1-218ENST00000439806 FERP16591 822 aa11.41□□□□□ -0.58
CPNE1-218ENST00000439806 VCAM1P19320 739 aa11.41□□□□□ -0.58
CPNE1-218ENST00000439806 EIF2AK2P19525 551 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms