RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TMEM150BA6NC51 233 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 RHOBTB3O94955 611 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 CNGA1P29973 690 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 TRIM50Q86XT4 487 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 LENG1Q96BZ8 264 aaPredicted RBP25.57■■□□□ 1.68
CPSF4-204ENST00000436336 CEP170P1Q96L14 293 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 NIFKQ9BYG3 293 aaKnown RBP25.57■■□□□ 1.68
CPSF4-204ENST00000436336 ERAP1Q9NZ08 941 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 NPHP3-ACAD11A0A0J9YXS1 232 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 IDEP14735 1019 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 GUCY2CP25092 1073 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 CPT1AP50416 773 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 NPEPPSP55786 919 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 CCDC65Q8IXS2 484 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 BBXQ8WY36 941 aaPredicted RBP25.57■■□□□ 1.68
CPSF4-204ENST00000436336 REEP2Q9BRK0 252 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 CYP26B1Q9NR63 512 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 EXOC1Q9NV70 894 aa25.57■■□□□ 1.68
CPSF4-204ENST00000436336 BMP6P22004 513 aa25.56■■□□□ 1.68
CPSF4-204ENST00000436336 DPCR1Q3MIW9 517 aa25.56■■□□□ 1.68
CPSF4-204ENST00000436336 ANO6Q4KMQ2 910 aa25.56■■□□□ 1.68
CPSF4-204ENST00000436336 BRDTQ58F21 947 aaPredicted RBP25.56■■□□□ 1.68
CPSF4-204ENST00000436336 GAS2L3Q86XJ1 694 aa25.56■■□□□ 1.68
CPSF4-204ENST00000436336 GTPBP4Q9BZE4 634 aaKnown RBP25.56■■□□□ 1.68
CPSF4-204ENST00000436336 PANK4Q9NVE7 773 aa25.56■■□□□ 1.68
CPSF4-204ENST00000436336 PTCH2Q9Y6C5 1203 aa25.56■■□□□ 1.68
CPSF4-204ENST00000436336 FRMD3A2A2Y4 597 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 CCND3P30281 292 aaPredicted RBP25.55■■□□□ 1.68
CPSF4-204ENST00000436336 GRK4P32298 578 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 RAD51AP2Q09MP3 1159 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 PLCB4Q15147 1175 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 ZNF658Q5TYW1 1059 aaPredicted RBP25.55■■□□□ 1.68
CPSF4-204ENST00000436336 ATP8B4Q8TF62 1192 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 SH2D3AQ9BRG2 576 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 C16orf70Q9BSU1 422 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 TIPINQ9BVW5 301 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 ODF2LQ9ULJ1 636 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 KAT6AQ92794 2004 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 FRMPD3Q5JV73 1810 aa25.55■■□□□ 1.68
CPSF4-204ENST00000436336 CAVIN2O95810 425 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 CACNB1Q02641 598 aaPredicted RBP25.54■■□□□ 1.68
CPSF4-204ENST00000436336 DNAJC25Q9H1X3 360 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 ZNF215Q9UL58 517 aaPredicted RBP25.54■■□□□ 1.68
CPSF4-204ENST00000436336 PPME1Q9Y570 386 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 USO1O60763 962 aaKnown RBP25.54■■□□□ 1.68
CPSF4-204ENST00000436336 RARBP10826 455 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 MARK3P27448 753 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 GJA9P57773 515 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 EHHADHQ08426 723 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 PSMD2Q13200 908 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 GSE1Q14687 1217 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 MTERF2Q49AM1 385 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 MLKLQ8NB16 471 aa25.54■■□□□ 1.68
CPSF4-204ENST00000436336 TBCAO75347 108 aaKnown RBP25.53■■□□□ 1.68
CPSF4-204ENST00000436336 DGAT1O75907 488 aa25.53■■□□□ 1.68
CPSF4-204ENST00000436336 INHAP05111 366 aa25.53■■□□□ 1.68
CPSF4-204ENST00000436336 ZNF286BP0CG31 522 aa25.53■■□□□ 1.68
CPSF4-204ENST00000436336 COASYQ13057 564 aa25.53■■□□□ 1.68
CPSF4-204ENST00000436336 UPF3AQ9H1J1 476 aaKnown RBP25.53■■□□□ 1.68
CPSF4-204ENST00000436336 DACH1Q9UI36 760 aa25.53■■□□□ 1.68
CPSF4-204ENST00000436336 PTPN22Q9Y2R2 807 aa25.53■■□□□ 1.68
CPSF4-204ENST00000436336 H3BRB1 525 aa25.52■■□□□ 1.68
CPSF4-204ENST00000436336 HBP1O60381 514 aa25.52■■□□□ 1.68
CPSF4-204ENST00000436336 NKX3-2P78367 333 aa25.52■■□□□ 1.68
CPSF4-204ENST00000436336 TARBP2Q15633 366 aaKnown RBP25.52■■□□□ 1.68
CPSF4-204ENST00000436336 C11orf57Q6ZUT1 292 aaPredicted RBP25.52■■□□□ 1.68
CPSF4-204ENST00000436336 NAT10Q9H0A0 1025 aaKnown RBP25.52■■□□□ 1.68
CPSF4-204ENST00000436336 TUT1Q9H6E5 874 aaKnown RBP25.52■■□□□ 1.68
CPSF4-204ENST00000436336 SPC25Q9HBM1 224 aa25.52■■□□□ 1.68
CPSF4-204ENST00000436336 COL4A3BPQ9Y5P4 624 aa25.52■■□□□ 1.68
CPSF4-204ENST00000436336 SYNRGQ9UMZ2 1314 aa25.52■■□□□ 1.68
CPSF4-204ENST00000436336 GAP43P17677 238 aa25.51■■□□□ 1.68
CPSF4-204ENST00000436336 FSCN1Q16658 493 aaKnown RBP25.51■■□□□ 1.68
CPSF4-204ENST00000436336 CEP89Q96ST8 783 aa25.51■■□□□ 1.68
CPSF4-204ENST00000436336 TRPC6Q9Y210 931 aa25.51■■□□□ 1.68
CPSF4-204ENST00000436336 RSPH10B2B2RC85 870 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 FAM13AO94988 1023 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 RSPH10BP0C881 870 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 HERC4Q5GLZ8 1057 aaPredicted RBP25.51■■□□□ 1.67
CPSF4-204ENST00000436336 MCPH1Q8NEM0 835 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 RNPEPQ9H4A4 650 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 ZHX3Q9H4I2 956 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 PDLIM7Q9NR12 457 aa25.51■■□□□ 1.67
CPSF4-204ENST00000436336 HIP1RO75146 1068 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 C6orf222P0C671 652 aaPredicted RBP25.5■■□□□ 1.67
CPSF4-204ENST00000436336 RFC5P40937 340 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 ZNF131P52739 623 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 BEX3Q00994 111 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 CT47A1Q5JQC4 288 aaPredicted RBP25.5■■□□□ 1.67
CPSF4-204ENST00000436336 ATP6V0A4Q9HBG4 840 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 PARVGQ9HBI0 331 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 DDX20Q9UHI6 824 aaKnown RBP25.5■■□□□ 1.67
CPSF4-204ENST00000436336 GDAQ9Y2T3 454 aa25.5■■□□□ 1.67
CPSF4-204ENST00000436336 KPNA6O60684 536 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 F2P00734 622 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 ZNF165P49910 485 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 POLGP54098 1239 aaPredicted RBP25.49■■□□□ 1.67
CPSF4-204ENST00000436336 IRX5P78411 483 aaPredicted RBP25.49■■□□□ 1.67
CPSF4-204ENST00000436336 STK4Q13043 487 aa25.49■■□□□ 1.67
CPSF4-204ENST00000436336 MAPK7Q13164 816 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms