RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 SCG5P05408 212 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 CTSBP07858 339 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 HNRNPCP07910 306 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 TSHRP16473 764 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 HOXC12P31275 282 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 AGFG1P52594 562 aaKnown RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 CACNB3P54284 484 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ARL4CP56559 192 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ETF1P62495 437 aaKnown RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 GPLD1P80108 840 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 PPP2R5DQ14738 602 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ANO6Q4KMQ2 910 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 JMJD6Q6NYC1 403 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF449Q6P9G9 518 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 POMZP3Q6PJE2 187 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 APOA5Q6Q788 366 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 TTLL7Q6ZT98 887 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 RFX8Q6ZV50 586 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 COLGALT2Q8IYK4 626 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 PRR18Q8N4B5 295 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ATG16L2Q8NAA4 619 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 UCMAQ8WVF2 138 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 FERMT2Q96AC1 680 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 WDR89Q96FK6 387 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 CGRRF1Q99675 332 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 SDF4Q9BRK5 362 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 UNKQ9C0B0 810 aaKnown RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 XPO4Q9C0E2 1151 aaKnown RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 MKRN2Q9H000 416 aaKnown RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF277Q9NRM2 450 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ATP8A2Q9NTI2 1148 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 AASSQ9UDR5 926 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF112Q9UJU3 913 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 GPR55Q9Y2T6 319 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 SNX13Q9Y5W8 968 aa6.14□□□□□ -1.43
HMGB3P10-201ENST00000434734 POM121BA6NF01 834 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 SOX1O00570 391 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 MGEA5O60502 916 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 KRT37O76014 449 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 ITGA4P13612 1032 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 GYS1P13807 737 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 CTNNA1P35221 906 aaKnown RBP6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 MTNR1BP49286 362 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 DNM2P50570 870 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 NR1H2P55055 460 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 PGS1Q32NB8 556 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 TOR2AQ5JU69 321 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 PGBD2Q6P3X8 592 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 PLBD1Q6P4A8 553 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 MCATQ8IVS2 390 aaKnown RBP6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 SYTL1Q8IYJ3 562 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 CCDC34Q96HJ3 373 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 ASB2Q96Q27 587 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 ORAI2Q96SN7 254 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 USP26Q9BXU7 913 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 LACRTQ9GZZ8 138 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 ADAM19Q9H013 955 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 STARD7Q9NQZ5 370 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 SH3BP1Q9Y3L3 701 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 NOC2LQ9Y3T9 749 aaKnown RBP6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 GPR45Q9Y5Y3 372 aa6.13□□□□□ -1.43
HMGB3P10-201ENST00000434734 KRBA1A5PL33 1030 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 ARNTLO00327 626 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 SMNDC1O75940 238 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 EOMESO95936 686 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 ITGB2P05107 769 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 HARSP12081 509 aaKnown RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 SLC9A1P19634 815 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 GBP1P32455 592 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 ADH7P40394 386 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 STAT1P42224 750 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 NPTX2P47972 431 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 HSPA7P48741 367 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 CEBPAP49715 358 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 COPAP53621 1224 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 ATXN1P54253 815 aaKnown RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 YARSP54577 528 aaKnown RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 BPIFB3P59826 476 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 ZNF445P59923 1031 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 GPR85P60893 370 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 IKBKEQ14164 716 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 POLD3Q15054 466 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 SMAD2Q15796 467 aaKnown RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 MPEG1Q2M385 716 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 RILPL1Q5EBL4 403 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 NUGGCQ68CJ6 796 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 LMBR1LQ6UX01 489 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 DSTYKQ6XUX3 929 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 RTL10Q7L3V2 364 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 LRRTM4Q86VH4 590 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 FTSJ3Q8IY81 847 aaKnown RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 TEX11Q8IYF3 940 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 IPO4Q8TEX9 1081 aaKnown RBP6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 C18orf8Q96DM3 657 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 TBC1D31Q96DN5 1066 aa6.12□□□□□ -1.43
HMGB3P10-201ENST00000434734 RADILQ96JH8 1075 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms