RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 FTOQ9C0B1 505 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 WNT8AQ9H1J5 351 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 ERAP1Q9NZ08 941 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 DDX25Q9UHL0 483 aaKnown RBP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF215Q9UL58 517 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 SMC3Q9UQE7 1217 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 PCDHA10Q9Y5I2 948 aa6.52□□□□□ -1.37
HMGB3P24-201ENST00000433260 CYP3A7-CYP3A51PA0A087WV96 503 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 GRXCR1A8MXD5 290 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 SOX1O00570 391 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 WNT7AO00755 349 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 LGR5O75473 907 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 BAG4O95429 457 aaKnown RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PSAPP07602 524 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 CKBP12277 381 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 ATP4AP20648 1035 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 CYP3A7P24462 503 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 TXKP42681 527 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 MCM2P49736 904 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 HMGN5P82970 282 aaKnown RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 SETQ01105 290 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 TMEM62Q0P6H9 643 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PPFIA1Q13136 1202 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PTK7Q13308 1070 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PPIGQ13427 754 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PLCB4Q15147 1175 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 GRIK4Q16099 956 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF618Q5T7W0 954 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM160B1Q5W0V3 765 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PDXDC2PQ6P474 469 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 NYAP1Q6ZVC0 841 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PLPPR4Q7Z2D5 763 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 MIER3Q7Z3K6 550 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 CCDC60Q8IWA6 550 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 RPUSD2Q8IZ73 545 aaKnown RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM177A1Q8N128 213 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 FBXO18Q8NFZ0 1043 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 LMBR1Q8WVP7 490 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 DHX38Q92620 1227 aaKnown RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 SLC5A5Q92911 643 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 TNFRSF25Q93038 417 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 SH2D3AQ9BRG2 576 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM49AQ9H0Q0 323 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 PRO3102Q9H379 93 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 UNC45AQ9H3U1 944 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 IL23AQ9NPF7 189 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 DISC1Q9NRI5 854 aa6.51□□□□□ -1.37
HMGB3P24-201ENST00000433260 LOXHD1Q8IVV2 1947 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 EVPLQ92817 2033 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 A0A087WWV3 80 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 IGKV6D-21A0A0A0MT36 114 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZBBXA8MT70 800 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 RSPH10B2B2RC85 870 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 KIF28PB7ZC32 967 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 H3BQV1 296 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 EML1O00423 815 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 SPTLC1O15269 473 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 ACTN4O43707 911 aaKnown RBP6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 PSMD10O75832 226 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 CTSHP09668 335 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 RSPH10BP0C881 870 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 GNAT1P11488 350 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 SELPP16109 830 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 KLRC1P26715 233 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 MCM7P33993 719 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 KRT76Q01546 638 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 TUSC1Q2TAM9 212 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 TMEM240Q5SV17 173 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 MARCH8Q5T0T0 291 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 NCAPH2Q6IBW4 605 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 PPP4R3AQ6IN85 833 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF746Q6NUN9 644 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 RUFY4Q6ZNE9 571 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 LRRC8DQ7L1W4 858 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 SERINC5Q86VE9 423 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 SMAP1Q8IYB5 467 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 CCDC155Q8N6L0 562 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 BANK1Q8NDB2 785 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 DNAJB3Q8WWF6 145 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 HAS1Q92839 578 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 PPP1R16BQ96T49 567 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 RIT2Q99578 217 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 NRBP2Q9NSY0 501 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 PCDHA12Q9UN75 941 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 PDE4DIPQ5VU43 2346 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 HTTP42858 3142 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 EMSYQ7Z589 1322 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 NRCAMQ92823 1304 aa6.5□□□□□ -1.37
HMGB3P24-201ENST00000433260 TMEM150BA6NC51 233 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 RRN3P2A6NIE6 340 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 WDR64B1ANS9 1081 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 HOXA2O43364 376 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 HBP1O60381 514 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms