RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 TGFB3P10600 412 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 MCM5P33992 734 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 GATMP50440 423 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 TDGQ13569 410 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 SEC23AQ15436 765 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 GNPTABQ3T906 1256 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 RTN4RL1Q86UN2 441 aaPredicted RBP11.79□□□□□ -0.52
HOXD3-203ENST00000432796 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 RRP36Q96EU6 259 aaKnown RBP11.79□□□□□ -0.52
HOXD3-203ENST00000432796 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 TCF25Q9BQ70 676 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 MLXIPQ9HAP2 919 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
HOXD3-203ENST00000432796 CYP26B1Q9NR63 512 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
HOXD3-203ENST00000432796 NCDNQ9UBB6 729 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 HCFC2Q9Y5Z7 792 aa11.79□□□□□ -0.52
HOXD3-203ENST00000432796 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 NOP56O00567 594 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 KINO60870 393 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 EOMESO95936 686 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 SCG2P13521 617 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 CCND2P30279 289 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 CD52P31358 61 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 SP2Q02086 613 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 PTH1RQ03431 593 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 DMWDQ09019 674 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 TBC1D8BQ0IIM8 1120 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 APOBRQ0VD83 1088 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 SPOUT1Q5T280 376 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 KIAA1841Q6NSI8 718 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 CYB5R4Q7L1T6 521 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 RSPH3Q86UC2 560 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 AGO3Q9H9G7 860 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 MAD2L2Q9UI95 211 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 ZNF215Q9UL58 517 aaPredicted RBP11.78□□□□□ -0.52
HOXD3-203ENST00000432796 NRCAMQ92823 1304 aa11.78□□□□□ -0.52
HOXD3-203ENST00000432796 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 PALM3A6NDB9 673 aaPredicted RBP11.77□□□□□ -0.53
HOXD3-203ENST00000432796 STK25O00506 426 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 PRC1O43663 620 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 MYCLP12524 364 aaPredicted RBP11.77□□□□□ -0.53
HOXD3-203ENST00000432796 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
HOXD3-203ENST00000432796 FGD1P98174 961 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 PLCB3Q01970 1234 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 BMP2KLQ5H9B9 411 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 RUFY4Q6ZNE9 571 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 C1orf210Q8IVY1 113 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 SMARCC2Q8TAQ2 1214 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
HOXD3-203ENST00000432796 MAP4K1Q92918 833 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 ACSF2Q96CM8 615 aaPredicted RBP11.77□□□□□ -0.53
HOXD3-203ENST00000432796 BORCS6Q96GS4 357 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 MAP3K14Q99558 947 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 IL25Q9H293 177 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
HOXD3-203ENST00000432796 STAM2O75886 525 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 WEE2P0C1S8 567 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 RFX1P22670 979 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 HSD17B4P51659 736 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 KRT32Q14532 448 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 ATAT1Q5SQI0 421 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 XRRA1Q6P2D8 792 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 COLGALT1Q8NBJ5 622 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 PIGSQ96S52 555 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 WNT16Q9UBV4 365 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 SQORQ9Y6N5 450 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
HOXD3-203ENST00000432796 PLXNA4Q9HCM2 1894 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 KRBA1A5PL33 1030 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 SPTLC1O15269 473 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 CDC45O75419 566 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 RPLP2P05387 115 aaKnown RBP11.75□□□□□ -0.53
HOXD3-203ENST00000432796 COL9A3Q14050 684 aaPredicted RBP11.75□□□□□ -0.53
HOXD3-203ENST00000432796 PPM1JQ5JR12 505 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 RARS2Q5T160 578 aaKnown RBP11.75□□□□□ -0.53
HOXD3-203ENST00000432796 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 MB21D2Q8IYB1 491 aaPredicted RBP11.75□□□□□ -0.53
HOXD3-203ENST00000432796 PIBF1Q8WXW3 757 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
HOXD3-203ENST00000432796 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 RIOX1Q9H6W3 641 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 KCNK12Q9HB15 430 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 DLGAP2Q9P1A6 1054 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 PADI3Q9ULW8 664 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 ZFYVE26Q68DK2 2539 aa11.75□□□□□ -0.53
HOXD3-203ENST00000432796 SPEGQ15772 3267 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms