RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CIR1Q86X95 450 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 RBM12BQ8IXT5 1001 aaKnown RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 NIM1KQ8IY84 436 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 TXNDC5Q8NBS9 432 aaKnown RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 CHST14Q8NCH0 376 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 MFSD3Q96ES6 412 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 BOCQ9BWV1 1114 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 ZNF341Q9BYN7 854 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 SLKQ9H2G2 1235 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 METTL14Q9HCE5 456 aaKnown RBP4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 CD248Q9HCU0 757 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 PPP4R1LQ9P1A2 415 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 CHPF2Q9P2E5 772 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 TCAF1Q9Y4C2 921 aa4.09□□□□□ -1.75
HMGB1P9-201ENST00000429856 C9orf118A6NHY6 69 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ZNF839A8K0R7 811 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 M0R2C6 588 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ACOT7O00154 380 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 CHGBP05060 677 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 JMJD7P0C870 316 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 SDSP20132 328 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 IRF9Q00978 393 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 DBPQ10586 325 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ADAM9Q13443 819 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 FHL2Q14192 279 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ZNF460Q14592 562 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 CFAP100Q494V2 611 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 PIK3R6Q5UE93 754 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 CD276Q5ZPR3 534 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 CDCA2Q69YH5 1023 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ZNF585AQ6P3V2 769 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 OTOP1Q7RTM1 612 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ZNF575Q86XF7 245 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 PROSER1Q86XN7 944 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 KIF18BQ86Y91 864 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 THNSL2Q86YJ6 484 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 NOSTRINQ8IVI9 506 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 PALM2Q8IXS6 379 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 PPM1KQ8N3J5 372 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 DTX3Q8N9I9 347 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 WNK4Q96J92 1243 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ORAI3Q9BRQ5 295 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 POLR3GLQ9BT43 218 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 WDR33Q9C0J8 1336 aaKnown RBP4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 JADE2Q9NQC1 790 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 KCNH7Q9NS40 1196 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ARHGAP28Q9P2N2 729 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 ING1Q9UK53 422 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 THRAP3Q9Y2W1 955 aaKnown RBP4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 TESMINQ9Y4I5 508 aa4.08□□□□□ -1.76
HMGB1P9-201ENST00000429856 PRAMEF25A6NGN4 478 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 FAM90A27PA6NNH2 459 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 CBX4O00257 560 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 DDX3XO00571 662 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 SCDO00767 359 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 GLRX3O76003 335 aaKnown RBP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 C4BPAP04003 597 aaKnown RBP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 PDGFRBP09619 1106 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 POU3F2P20265 443 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 TGM1P22735 817 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 MECP2P51608 486 aaKnown RBP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 INHBEP58166 350 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 PRR31Q5SQ13 230 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 TMC5Q6UXY8 1006 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 LRRTM3Q86VH5 581 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 DHX37Q8IY37 1157 aaKnown RBP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 AHI1Q8N157 1196 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 PRPF38AQ8NAV1 312 aaKnown RBP4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 DNERQ8NFT8 737 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 IGDCC4Q8TDY8 1250 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 DLG3Q92796 817 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 ZSWIM3Q96MP5 696 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 TMX1Q9H3N1 280 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 CROTQ9UKG9 612 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 B3GALT1Q9Y5Z6 326 aa4.07□□□□□ -1.76
HMGB1P9-201ENST00000429856 A0A087X0B3 334 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 H7C1D1 291 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 KCNK3O14649 394 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 MUSKO15146 869 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 FBXO21O94952 628 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 S100BP04271 92 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 CYP1A1P04798 512 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 ZNF28P17035 718 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 PTGS1P23219 599 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 AOAHP28039 575 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 SDHAP31040 664 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 SELENOPP49908 381 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 NEK4P51957 841 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 PPP2CBP62714 309 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 PPP2CAP67775 309 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 PFKPQ01813 784 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 SMAD2Q15796 467 aaKnown RBP4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 SKIDA1Q1XH10 827 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 TM4SF20Q53R12 229 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 PRAMEF18Q5VWM3 479 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 CC2D1AQ6P1N0 951 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 PKN3Q6P5Z2 889 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 DPP8Q6V1X1 898 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 STK32CQ86UX6 486 aa4.06□□□□□ -1.76
HMGB1P9-201ENST00000429856 UBR7Q8N806 425 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms