RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 IGKV6D-21A0A0A0MT36 114 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 FARP2O94887 1054 aaPredicted RBP16.79■□□□□ 0.28
ACTB-204ENST00000425660 SUPT20HL2P0C7V6 817 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
ACTB-204ENST00000425660 KCNJ6P48051 423 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 DNM2P50570 870 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 HUNKP57058 714 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 NEDD9Q14511 834 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 CYFIP1Q7L576 1253 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 OTUD6AQ7L8S5 288 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 CCDC60Q8IWA6 550 aaPredicted RBP16.79■□□□□ 0.28
ACTB-204ENST00000425660 TC2NQ8N9U0 490 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 CCDC112Q8NEF3 446 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 TELO2Q9Y4R8 837 aa16.79■□□□□ 0.28
ACTB-204ENST00000425660 BACH1O14867 736 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 STRNO43815 780 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 PPP1R37O75864 691 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 GCNT3O95395 438 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 GNA14O95837 355 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 TPM2P07951 284 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 UBXN1Q04323 297 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 NOLC1Q14978 699 aaKnown RBP eCLIP16.78■□□□□ 0.28
ACTB-204ENST00000425660 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
ACTB-204ENST00000425660 SWSAP1Q6NVH7 229 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 CREBRFQ8IUR6 639 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 FAM178BQ8IXR5 827 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 POLD4Q9HCU8 107 aa16.78■□□□□ 0.28
ACTB-204ENST00000425660 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
ACTB-204ENST00000425660 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
ACTB-204ENST00000425660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.78■□□□□ 0.283e-23■□□□□ 10.8
ACTB-204ENST00000425660 MAFBQ9Y5Q3 323 aaPredicted RBP16.78■□□□□ 0.28
ACTB-204ENST00000425660 NKRFO15226 690 aaKnown RBP eCLIP16.77■□□□□ 0.286e-13■□□□□ 9.5
ACTB-204ENST00000425660 PRPF6O94906 941 aaKnown RBP16.77■□□□□ 0.28
ACTB-204ENST00000425660 PRKCSHP14314 528 aaPredicted RBP16.77■□□□□ 0.28
ACTB-204ENST00000425660 TRIM14Q14142 442 aa16.77■□□□□ 0.28
ACTB-204ENST00000425660 NFIL3Q16649 462 aa16.77■□□□□ 0.28
ACTB-204ENST00000425660 FAM110CQ1W6H9 321 aa16.77■□□□□ 0.28
ACTB-204ENST00000425660 METTL7BQ6UX53 244 aa16.77■□□□□ 0.28
ACTB-204ENST00000425660 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.28
ACTB-204ENST00000425660 NOC4LQ9BVI4 516 aaKnown RBP16.77■□□□□ 0.28
ACTB-204ENST00000425660 KCND1Q9NSA2 647 aa16.77■□□□□ 0.28
ACTB-204ENST00000425660 TMEM150BA6NC51 233 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 NRDCO43847 1150 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 GYPCP04921 128 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 PLS3P13797 630 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.27
ACTB-204ENST00000425660 MAN2A1Q16706 1144 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 ZNF792Q3KQV3 632 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 XKR9Q5GH70 373 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 WDR78Q5VTH9 848 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 CEP135Q66GS9 1140 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 TMEM139Q8IV31 216 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 DRC1Q96MC2 740 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.27
ACTB-204ENST00000425660 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.27
ACTB-204ENST00000425660 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.27
ACTB-204ENST00000425660 DDX41Q9UJV9 622 aaKnown RBP16.77■□□□□ 0.27
ACTB-204ENST00000425660 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 ASB14A6NK59 587 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 TGFB1I1O43294 461 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 CALUO43852 315 aaPredicted RBP16.76■□□□□ 0.27
ACTB-204ENST00000425660 USO1O60763 962 aaKnown RBP16.76■□□□□ 0.27
ACTB-204ENST00000425660 NMT1P30419 496 aaKnown RBP16.76■□□□□ 0.27
ACTB-204ENST00000425660 NPEPPSP55786 919 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 PRKCEQ02156 737 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 KCNA1Q09470 495 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 ADAM9Q13443 819 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 ALCAMQ13740 583 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 VWA3BQ502W6 1294 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 XKR3Q5GH77 459 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 SAPCD2Q86UD0 394 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 ERGIC2Q96RQ1 377 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 ZMYM2Q9UBW7 1377 aa16.76■□□□□ 0.27
ACTB-204ENST00000425660 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
ACTB-204ENST00000425660 CETN3O15182 167 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 NR2F2P24468 414 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 SP4Q02446 784 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 RBL2Q08999 1139 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 CCDC62Q6P9F0 684 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
ACTB-204ENST00000425660 PPFIBP1Q86W92 1011 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 C17orf53Q8N3J3 647 aaPredicted RBP16.75■□□□□ 0.27
ACTB-204ENST00000425660 PANX2Q96RD6 677 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 NDST4Q9H3R1 872 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 PASKQ96RG2 1323 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 GSTTP1A0A1W2PQM5 241 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 STX10O60499 249 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 MFAP3LO75121 409 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 ARIH2O95376 493 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 ADORA2AP29274 412 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 ADKP55263 362 aaKnown RBP16.75■□□□□ 0.27
ACTB-204ENST00000425660 TBC1D8BQ0IIM8 1120 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 ZC2HC1CQ53FD0 456 aaPredicted RBP16.75■□□□□ 0.27
ACTB-204ENST00000425660 CNGA4Q8IV77 575 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms