RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 GNA14O95837 355 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 HERC4Q5GLZ8 1057 aaPredicted RBP18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 HES6Q96HZ4 224 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 RSRC1Q96IZ7 334 aaKnown RBP18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 CCDC87Q9NVE4 849 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 DCCP43146 1447 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 ASAP2O43150 1006 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 PON1P27169 355 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 HIBADHP31937 336 aaKnown RBP18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 CASP5P51878 434 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 PLTPP55058 493 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 EIF3BP55884 814 aaKnown RBP18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 SATB1Q01826 763 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 PDIA5Q14554 519 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 DIXDC1Q155Q3 683 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 TRPM8Q7Z2W7 1104 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 HOOK3Q86VS8 718 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 ZNF622Q969S3 477 aaKnown RBP eCLIP18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 RAB34Q9BZG1 259 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 ZHX3Q9H4I2 956 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 EMILIN3Q9NT22 766 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 CD2APQ9Y5K6 639 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 DDX3XO00571 662 aaKnown RBP eCLIP18.12■□□□□ 0.493e-19■■■□□ 15.3
NPC1L1-203ENST00000423141 FLOT1O75955 427 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 VIMP08670 466 aaKnown RBP18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 H2AFZP0C0S5 128 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 NR2F2P24468 414 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 SLCO1A2P46721 670 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 TNNI2P48788 182 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 LRCH2Q5VUJ6 765 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 H2AFVQ71UI9 128 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 U2AF1L4Q8WU68 220 aaKnown RBP18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 TGFBRAP1Q8WUH2 860 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 PRCCQ92733 491 aaPredicted RBP18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 HAS1Q92839 578 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 HOOK2Q96ED9 719 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 PPP1R9AQ9ULJ8 1098 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 NENFQ9UMX5 172 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 C15orf41Q9Y2V0 281 aa18.12■□□□□ 0.49
NPC1L1-203ENST00000423141 CCNHP51946 323 aaPredicted RBP18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 PMS2P54278 862 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 ITIH4Q14624 930 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 LRRC27Q9C0I9 530 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 SNX24Q9Y343 169 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 FRMPD2Q68DX3 1309 aaPredicted RBP18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 USP17L5A8MUK1 530 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 UBOX5O94941 541 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 GSTA1P08263 222 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 DR1Q01658 176 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 KLRC3Q07444 240 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 SLC29A2Q14542 456 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 DUPD1Q68J44 220 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 MAPKAPK5Q8IW41 473 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 MAB21L3Q8N8X9 362 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 FBXO25Q8TCJ0 367 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 NEK9Q8TD19 979 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 PABPC3Q9H361 631 aaKnown RBP18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 KCNMB3Q9NPA1 279 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 INTS9Q9NV88 658 aaKnown RBP18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 SAMD15Q9P1V8 674 aa18.11■□□□□ 0.49
NPC1L1-203ENST00000423141 A8MUI8 341 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 NUDT17P0C025 328 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 SLC8A3P57103 927 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 UBE2SQ16763 222 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 EXOC3L4Q17RC7 722 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 CCDC38Q502W7 563 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 DCAF17Q5H9S7 520 aaPredicted RBP18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 CRELD2Q6UXH1 353 aaPredicted RBP18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 FMNL3Q8IVF7 1028 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 EPS8L3Q8TE67 593 aaKnown RBP18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 KIAA1024Q9UPX6 916 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 AFF2P51816 1311 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 IGSF9BQ9UPX0 1349 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 CETN3O15182 167 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 GALCP54803 685 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 PTENP60484 403 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 ORC2Q13416 577 aaPredicted RBP18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 GRIK5Q16478 980 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 DENND2CQ68D51 928 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 ZDHHC24Q6UX98 284 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 GPBP1Q86WP2 473 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 TBC1D22AQ8WUA7 517 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 PGM2Q96G03 612 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 L3MBTL3Q96JM7 780 aaPredicted RBP18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 ZNF570Q96NI8 536 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 ERP44Q9BS26 406 aa18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 BZW2Q9Y6E2 419 aaKnown RBP18.1■□□□□ 0.49
NPC1L1-203ENST00000423141 PPP1R12AO14974 1030 aaPredicted RBP18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 RGS16O15492 202 aaPredicted RBP18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 AADACL2Q6P093 401 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 SLC51AQ86UW1 340 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 SEMA4AQ9H3S1 761 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 ATAD5Q96QE3 1844 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 RPTORQ8N122 1335 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
NPC1L1-203ENST00000423141 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms