RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 KANK2Q63ZY3 851 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 FSTL4Q6MZW2 842 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 HIPK4Q8NE63 616 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 FOXRED1Q96CU9 486 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 OR10A5Q9H207 317 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 FANCLQ9NW38 375 aa5.29□□□□□ -1.56
HMGB3P23-201ENST00000414981 CBX4O00257 560 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 DVL2O14641 736 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 ADRB1P08588 477 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 CD83Q01151 205 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 ZNF827Q17R98 1081 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 TRIM68Q6AZZ1 485 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 LIMS2Q7Z4I7 341 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 IFNL2Q8IZJ0 200 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 JADE2Q9NQC1 790 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 SMPD4Q9NXE4 827 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 CD2APQ9Y5K6 639 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 DCAF1Q9Y4B6 1507 aa5.28□□□□□ -1.56
HMGB3P23-201ENST00000414981 A0A0G2JNJ9 132 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 H7C1D1 291 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 CNOT4O95628 575 aaKnown RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 CDK11BP21127 795 aaKnown RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 APEX1P27695 318 aaKnown RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 KIF11P52732 1056 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 ALDH6A1Q02252 535 aaKnown RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZNF174Q15697 407 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZMAT1Q5H9K5 638 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 TMEM200BQ69YZ2 307 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 LRSAM1Q6UWE0 723 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 RTN4RL1Q86UN2 441 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 CIR1Q86X95 450 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 NME9Q86XW9 330 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 LOXL4Q96JB6 756 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 FOXB1Q99853 325 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 C1QTNF3Q9BXJ4 246 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 MTFR1LQ9H019 292 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 IFT57Q9NWB7 429 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 Q9UFV3 132 aa5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 MRPL42Q9Y6G3 142 aaKnown RBP5.27□□□□□ -1.57
HMGB3P23-201ENST00000414981 GPR42O15529 346 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 CDC45O75419 566 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 KRT37O76014 449 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZNF888P0CJ79 500 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 NFKB2Q00653 900 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 MOGSQ13724 837 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 TKFCQ3LXA3 575 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 DBX2Q6ZNG2 339 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 KIAA0907Q7Z7F0 614 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 LRRTM3Q86VH5 581 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 AHI1Q8N157 1196 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 CHST13Q8NET6 341 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 DNERQ8NFT8 737 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 C16orf92Q96LL3 132 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 FEZ1Q99689 392 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 PTPN18Q99952 460 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 PLAAQ9Y263 795 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZKSCAN5Q9Y2L8 839 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
HMGB3P23-201ENST00000414981 FAM83GA6ND36 823 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 F2P00734 622 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 HMGCRP04035 888 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 KCNQ1P51787 676 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 NEK4P51957 841 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 ADAM17P78536 824 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 ADCY1Q08828 1119 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 NFYCQ13952 458 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 EPHA7Q15375 998 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZNF568Q3ZCX4 644 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 DALRD3Q5D0E6 543 aaKnown RBP5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 GRAMD4Q6IC98 578 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 OTOP2Q7RTS6 562 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 GPR155Q7Z3F1 870 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 JAZF1Q86VZ6 243 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 NIM1KQ8IY84 436 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 KIAA1958Q8N8K9 716 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 ERCC4Q92889 916 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 MAML3Q96JK9 1138 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 LMF1Q96S06 567 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 MEGF9Q9H1U4 602 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 PCIF1Q9H4Z3 704 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 MSL2Q9HCI7 577 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 PTPN22Q9Y2R2 807 aa5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZCCHC6Q5VYS8 1495 aaKnown RBP5.25□□□□□ -1.57
HMGB3P23-201ENST00000414981 TLDC2A0PJX2 215 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 PATE3B3GLJ2 98 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 ENPP3O14638 875 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 HSP90B1P14625 803 aaKnown RBP5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZEB1P37275 1124 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 ADCY8P40145 1251 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 RAC3P60763 192 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 ROM1Q03395 351 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 MAP3K12Q12852 859 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 C21orf62-AS1Q17RA5 79 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 USP30Q70CQ3 517 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 LARP4Q71RC2 724 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 NEIL1Q96FI4 390 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 BORCS6Q96GS4 357 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 GPR20Q99678 358 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms