RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 PPP1R16BQ96T49 567 aa8.67□□□□□ -1.02
CPSF4-202ENST00000412686 LXNQ9BS40 222 aa8.67□□□□□ -1.02
CPSF4-202ENST00000412686 BMP2KQ9NSY1 1161 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-202ENST00000412686 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-202ENST00000412686 ATMINO43313 823 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 NBNO60934 754 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 MED24O75448 989 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 C22orf31O95567 290 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 GNAT1P11488 350 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 KLRC1P26715 233 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 QARSP47897 775 aaKnown RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 CLCN3P51790 818 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 PSMC5P62195 406 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 GRIN1Q05586 938 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 RBL2Q08999 1139 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 ORC2Q13416 577 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 PDAP1Q13442 181 aaKnown RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 DRP2Q13474 957 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 BFSP2Q13515 415 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 SHHQ15465 462 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 TCTN1Q2MV58 587 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 MTERF2Q49AM1 385 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 MTHFD1LQ6UB35 978 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 ANO5Q75V66 913 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 LRRC71Q8N4P6 559 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 TMEM199Q8N511 208 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 CAGE1Q8TC20 777 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 CEP89Q96ST8 783 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 EIF2AK1Q9BQI3 630 aaKnown RBP8.66□□□□□ -1.02
CPSF4-202ENST00000412686 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.021e-8■■□□□ 14.1
CPSF4-202ENST00000412686 CLIC4Q9Y696 253 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 TET1Q8NFU7 2136 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 EVPLQ92817 2033 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 LOXHD1Q8IVV2 1947 aa8.66□□□□□ -1.02
CPSF4-202ENST00000412686 COL1A2P08123 1366 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 PTPRSQ13332 1948 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 RRN3P2A6NIE6 340 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 DDX11L8A8MPP1 907 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 SLITRK3O94933 977 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 CHRNA1P02708 482 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 P4HBP07237 508 aaKnown RBP8.65□□□□□ -1.02
CPSF4-202ENST00000412686 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 SELPP16109 830 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 CDC25AP30304 524 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 BMP8BP34820 402 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 NPEPPSP55786 919 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 ATP2C1P98194 919 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-202ENST00000412686 CEBPZQ03701 1054 aaKnown RBP8.65□□□□□ -1.02
CPSF4-202ENST00000412686 MGAT3Q09327 533 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 PPIGQ13427 754 aaKnown RBP eCLIP8.65□□□□□ -1.024e-6■□□□□ 10.4
CPSF4-202ENST00000412686 SF3A1Q15459 793 aaKnown RBP8.65□□□□□ -1.02
CPSF4-202ENST00000412686 TARBP2Q15633 366 aaKnown RBP8.65□□□□□ -1.02
CPSF4-202ENST00000412686 ECM1Q16610 540 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 ZNF484Q5JVG2 852 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 TMEM240Q5SV17 173 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 POTEGQ6S5H5 508 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 ZNF365Q70YC5 407 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 BRAPQ7Z569 592 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 TPH2Q8IWU9 490 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 CHAMP1Q96JM3 812 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 ZNF668Q96K58 619 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-202ENST00000412686 FAM167AQ96KS9 214 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 USP28Q96RU2 1077 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 HSD17B14Q9BPX1 270 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 IL23AQ9NPF7 189 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 PCDHA2Q9Y5H9 948 aa8.65□□□□□ -1.02
CPSF4-202ENST00000412686 DNAH12Q6ZR08 3092 aa8.65□□□□□ -1.03
CPSF4-202ENST00000412686 VWA3AA6NCI4 1184 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 RSPH10B2B2RC85 870 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 VTNP04004 478 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 RSPH10BP0C881 870 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 YWHABP31946 246 aaKnown RBP8.64□□□□□ -1.03
CPSF4-202ENST00000412686 PSEN1P49768 467 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 PTPAQ15257 358 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 XKR3Q5GH77 459 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 EFCAB12Q6NXP0 572 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 TAF2Q6P1X5 1199 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 OTOP2Q7RTS6 562 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 CATSPER3Q86XQ3 398 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 C4orf19Q8IY42 314 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 METTL13Q8N6R0 699 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 LINC01465Q8N7H1 131 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 PIGOQ8TEQ8 1089 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 NIFKQ9BYG3 293 aaKnown RBP8.64□□□□□ -1.03
CPSF4-202ENST00000412686 ZSWIM4Q9H7M6 989 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 SUGCTQ9HAC7 445 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 NRBP2Q9NSY0 501 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 CXXC1Q9P0U4 656 aaPredicted RBP8.64□□□□□ -1.03
CPSF4-202ENST00000412686 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 GINS2Q9Y248 185 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 ZDHHC9Q9Y397 364 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 CDY2AQ9Y6F7 541 aa8.64□□□□□ -1.03
CPSF4-202ENST00000412686 SMIM35A0A1B0GVV1 85 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms