RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PPFIA4O75335 1185 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 FAM228BP0C875 321 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 MKRN3Q13064 507 aaKnown RBP14.61□□□□□ -0.07
COL6A2-204ENST00000409416 PLA2G4FQ68DD2 849 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 GLYCTKQ8IVS8 523 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 OR2W6PQ8NHA6 318 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 ANKS1AQ92625 1134 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 TCHPQ9BT92 498 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 VIPAS39Q9H9C1 493 aa14.61□□□□□ -0.07
COL6A2-204ENST00000409416 PVALEFA0A1B0GWK0 134 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 NDUFAB1O14561 156 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 PPP1R12BO60237 982 aaPredicted RBP14.6□□□□□ -0.07
COL6A2-204ENST00000409416 GLI1P08151 1106 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 FAM153BP0C7A2 387 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 EPB41P11171 864 aaKnown RBP14.6□□□□□ -0.07
COL6A2-204ENST00000409416 DHX9Q08211 1270 aaKnown RBP14.6□□□□□ -0.07
COL6A2-204ENST00000409416 FAM153CQ494X1 144 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 HAUS3Q68CZ6 603 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 TLR10Q9BXR5 811 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 ARHGEF10LQ9HCE6 1279 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 FAM153AQ9UHL3 310 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 PTPN22Q9Y2R2 807 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 A0A1W2PQJ5 194 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 H0YHG0 523 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 EPHB4P54760 987 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 KCNMA1Q12791 1236 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 CCDC50Q8IVM0 306 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 PPP1R13LQ8WUF5 828 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 DDX47Q9H0S4 455 aaKnown RBP14.6□□□□□ -0.07
COL6A2-204ENST00000409416 ARP10275 920 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 SEZ6Q53EL9 994 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 RNF187Q5TA31 235 aaPredicted RBP14.6□□□□□ -0.07
COL6A2-204ENST00000409416 LRRC55Q6ZSA7 311 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 IFT20Q8IY31 132 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 JDP2Q8WYK2 163 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 MTMR9Q96QG7 549 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 PLCB1Q9NQ66 1216 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 FAM198AQ9UFP1 575 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 USTQ9Y2C2 406 aa14.6□□□□□ -0.07
COL6A2-204ENST00000409416 XIRP1Q702N8 1843 aaKnown RBP14.6□□□□□ -0.07
COL6A2-204ENST00000409416 IRAK1P51617 712 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 KLHDC7AQ5VTJ3 777 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 CC2D2BQ6DHV5 1058 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 BAP1Q92560 729 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 EIF2AK1Q9BQI3 630 aaKnown RBP14.59□□□□□ -0.07
COL6A2-204ENST00000409416 LRRC27Q9C0I9 530 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 DHX36Q9H2U1 1008 aaKnown RBP14.59□□□□□ -0.07
COL6A2-204ENST00000409416 A0A1B0GUL6 1792 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 GCOM1H8Y6P7 765 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-204ENST00000409416 POLR2MP0CAP2 368 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 PPFIA1Q13136 1202 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 NNTQ13423 1086 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 RRP1BQ14684 758 aaKnown RBP14.59□□□□□ -0.07
COL6A2-204ENST00000409416 XKR9Q5GH70 373 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 MIER3Q7Z3K6 550 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 ZIM3Q96PE6 472 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 ZNF408Q9H9D4 720 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 RIC8AQ9NPQ8 531 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 CLGNO14967 610 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 OSTNP61366 133 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 TRIP13Q15645 432 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-204ENST00000409416 PEX26Q7Z412 305 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 PAGR1Q9BTK6 254 aa14.59□□□□□ -0.07
COL6A2-204ENST00000409416 SERPING1P05155 500 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 CYP11B2P19099 503 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 AARSP49588 968 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A2-204ENST00000409416 PEX3P56589 373 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 IFFO1Q0D2I5 559 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 SPP2Q13103 211 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 CEP85LQ5SZL2 805 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 SH3BP5LQ7L8J4 393 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 MMGT1Q8N4V1 131 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 AENQ8WTP8 325 aaKnown RBP14.58□□□□□ -0.08
COL6A2-204ENST00000409416 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 CTTNBP2NLQ9P2B4 639 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 ASTN2O75129 1339 aaPredicted RBP14.58□□□□□ -0.08
COL6A2-204ENST00000409416 CEP350Q5VT06 3117 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 ROBO1Q9Y6N7 1651 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 GOLGA6L10A6NI86 522 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 SLC16A4O15374 487 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 MSH4O15457 936 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 RPS6KA1Q15418 735 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 CDR2LQ86X02 465 aaPredicted RBP14.58□□□□□ -0.08
COL6A2-204ENST00000409416 P2RX7Q99572 595 aaKnown RBP14.58□□□□□ -0.08
COL6A2-204ENST00000409416 POP1Q99575 1024 aaKnown RBP14.58□□□□□ -0.08
COL6A2-204ENST00000409416 ABCA3Q99758 1704 aa14.58□□□□□ -0.08
COL6A2-204ENST00000409416 TLR2O60603 784 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 IL1R1P14778 569 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL6A2-204ENST00000409416 GUCY1A3Q02108 690 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 BIRC3Q13489 604 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 SNX1Q13596 522 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 MESDQ14696 234 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 FIGNQ5HY92 759 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 FAM186BQ8IYM0 893 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 SCFD1Q8WVM8 642 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
COL6A2-204ENST00000409416 STK32BQ9NY57 414 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms