RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 HSCBQ8IWL3 235 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 SCUBE1Q8IWY4 988 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 OR2W6PQ8NHA6 318 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 NSUN6Q8TEA1 469 aaKnown RBP6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 PMEPA1Q969W9 287 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 AARSD1Q9BTE6 412 aaKnown RBP6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 ANP32EQ9BTT0 268 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 ZC3H12CQ9C0D7 883 aaKnown RBP6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 RRAGCQ9HB90 399 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 CD248Q9HCU0 757 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 PDLIM7Q9NR12 457 aa6.18□□□□□ -1.42
HMGB3P7-201ENST00000400214 MEIS3P2A8K0S8 358 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 FAM155AB1AL88 458 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 EYA2O00167 538 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 TPP1O14773 563 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 DDX3YO15523 660 aaKnown RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 GFPT2O94808 682 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 UFL1O94874 794 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 IL33O95760 270 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 IGHDP01880 384 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 ACRP10323 421 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 EDN3P14138 238 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 FSHRP23945 695 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 GRNP28799 593 aaKnown RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 TM4SF4P48230 202 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 RFX5P48382 616 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 SUMO1P63165 101 aaKnown RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 MPP1Q00013 466 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 CXCL9Q07325 125 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 FSTL1Q12841 308 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 TNIP1Q15025 636 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 CFAP100Q494V2 611 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 SV2CQ496J9 727 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 INTS11Q5TA45 600 aaKnown RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 VPS53Q5VIR6 699 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 IER5Q5VY09 327 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 CIAPIN1Q6FI81 312 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 CATIPQ7Z7H3 387 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 DZIP1LQ8IYY4 767 aaKnown RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 MYCT1Q8N699 235 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 ATRIPQ8WXE1 791 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 DPF2Q92785 391 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 FRAT1Q92837 279 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 CCDC138Q96M89 665 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 TAAR9Q96RI9 348 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 MEIS3Q99687 375 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 WDR12Q9GZL7 423 aaKnown RBP6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 SLC12A7Q9Y666 1083 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 ZNF804BA4D1E1 1349 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 MROH5Q6ZUA9 1318 aa6.17□□□□□ -1.42
HMGB3P7-201ENST00000400214 FAM86C2PA6NEL3 165 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 WTIPA6NIX2 430 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 ZNF891A8MT65 544 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 AGRPO00253 132 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 NCAM2O15394 837 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 ECE2O60344 883 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 CTNND1O60716 968 aaKnown RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 CIAO1O76071 339 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 INMTO95050 263 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 CNOT4O95628 575 aaKnown RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 C6orf222P0C671 652 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 HSPA6P17066 643 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 RPS12P25398 132 aaKnown RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 HOXC13P31276 330 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 RAD52P43351 418 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 GRIA4P48058 902 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 MMP14P50281 582 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 HTRA3P83110 453 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 CENPCQ03188 943 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 FAAP100Q0VG06 881 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 HSP90AA2PQ14568 343 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 GPATCH4Q5T3I0 446 aaKnown RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 TRIM46Q7Z4K8 759 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 TXNRD3Q86VQ6 643 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 SLFN12Q8IYM2 578 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 TMEM57Q8N5G2 664 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 VGLL2Q8N8G2 317 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 C1orf162Q8NEQ5 155 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 SLC35G2Q8TBE7 412 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 TMEM40Q8WWA1 233 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 SCLYQ96I15 445 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 FAXDC2Q96IV6 333 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 NIFKQ9BYG3 293 aaKnown RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 COA1Q9GZY4 146 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 SMOC1Q9H4F8 434 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 TAF1DQ9H5J8 278 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 GPRC5DQ9NZD1 345 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 HACL1Q9UJ83 578 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 TNNQ9UQP3 1299 aa6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 MAGED1Q9Y5V3 778 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P7-201ENST00000400214 AKAP11Q9UKA4 1901 aa6.15□□□□□ -1.42
HMGB3P7-201ENST00000400214 PSMD14O00487 310 aa6.15□□□□□ -1.42
HMGB3P7-201ENST00000400214 TOR1BO14657 336 aa6.15□□□□□ -1.42
HMGB3P7-201ENST00000400214 PRODHO43272 600 aa6.15□□□□□ -1.42
HMGB3P7-201ENST00000400214 AP1G1O43747 822 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms