RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CCDC153Q494R4 210 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 FIGNQ5HY92 759 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 MTA3Q9BTC8 594 aa10.71□□□□□ -0.69
PTPRM-203ENST00000400060 PNPLA6Q8IY17 1366 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 B4E1Z4 1266 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 PYGBP11216 843 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 CCDC15Q0P6D6 951 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 CBX3Q13185 183 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 SNRNP27Q8WVK2 155 aaKnown RBP10.71□□□□□ -0.7
PTPRM-203ENST00000400060 PRPF31Q8WWY3 499 aaKnown RBP10.71□□□□□ -0.7
PTPRM-203ENST00000400060 ERP27Q96DN0 273 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 NSL1Q96IY1 281 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 UBN1Q9NPG3 1134 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 SAR1AQ9NR31 198 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 DNAAF2Q9NVR5 837 aaKnown RBP10.71□□□□□ -0.7
PTPRM-203ENST00000400060 WDR35Q9P2L0 1181 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 FRMD4BQ9Y2L6 1034 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.7
PTPRM-203ENST00000400060 PDS5AQ29RF7 1337 aaKnown RBP10.71□□□□□ -0.7
PTPRM-203ENST00000400060 ESYT3A0FGR9 886 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 BTBD18B2RXH4 712 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 GPAA1O43292 621 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 GFPT2O94808 682 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 FNTAP49354 379 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 RBM5P52756 815 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 KIF2BQ8N4N8 673 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ANKRD13CQ8N6S4 541 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 GALNT8Q9NY28 637 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 KCNJ14Q9UNX9 436 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 SSX2IPQ9Y2D8 614 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 CEP152O94986 1710 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 AFF2P51816 1311 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 XIAPP98170 497 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 PPARDQ03181 441 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 TBL3Q12788 808 aaKnown RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 RCN1Q15293 331 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 CHRNA2Q15822 529 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 KYNUQ16719 465 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ZC3H15Q8WU90 426 aaKnown RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 PGM2Q96G03 612 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 EXOC1LA0A1B0GW35 172 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ARHGEF9O43307 516 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ATP5BP06576 529 aaKnown RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 SLCO1A2P46721 670 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ARPC4P59998 168 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 HIC1Q14526 733 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 PPP1R2P3Q6NXS1 205 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 TRIM63Q969Q1 353 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 CCDC134Q9H6E4 229 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 EHMT1Q9H9B1 1298 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ATAD3AQ9NVI7 634 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 HPSEQ9Y251 543 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 L3MBTL1Q9Y468 752 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 CDC42BPAQ5VT25 1732 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ADGRA3Q8IWK6 1321 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 TMEM2Q9UHN6 1383 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 EIF4E1BA6NMX2 242 aaKnown RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 TBKBP1A7MCY6 615 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 MGEA5O60502 916 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 TRPA1O75762 1119 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 APOEP02649 317 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 PCP11498 1178 aaKnown RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 CA4P22748 312 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 HMOX2P30519 316 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 VPS41P49754 854 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 ERVK-24P63145 666 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 FMR1Q06787 632 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 RNF43Q68DV7 783 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 RGS9BPQ6ZS82 235 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 FRA10AC1Q70Z53 315 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 MARK2Q7KZI7 788 aaKnown RBP10.7□□□□□ -0.7
PTPRM-203ENST00000400060 JADE3Q92613 823 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 RPS6KC1Q96S38 1066 aa10.7□□□□□ -0.7
PTPRM-203ENST00000400060 RASA4BC9J798 803 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 GIPC1O14908 333 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 RASA4O43374 803 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 RAD51CO43502 376 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 S100BP04271 92 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ACADVLP49748 655 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 POLGP54098 1239 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 UAP1Q16222 522 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 MFSD4BQ5TF39 518 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF184Q99676 751 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TRIM56Q9BRZ2 755 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 AP1M1Q9BXS5 423 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PABPC3Q9H361 631 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 MKNK2Q9HBH9 465 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 IQANK1A0A1B0GTG1 560 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 DDAH1O94760 285 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 RXRAP19793 462 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 SERPINB10P48595 397 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms