RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 RAD9BQ6WBX8 426 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 SH3RF1Q7Z6J0 888 aa15.28■□□□□ 0.04
SCAF4-202ENST00000399804 DOT1LQ8TEK3 1739 aa15.27■□□□□ 0.04
SCAF4-202ENST00000399804 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.04
SCAF4-202ENST00000399804 ZNF18P17022 549 aa15.27■□□□□ 0.04
SCAF4-202ENST00000399804 PDE6CP51160 858 aa15.27■□□□□ 0.04
SCAF4-202ENST00000399804 MFAP3P55082 362 aa15.27■□□□□ 0.04
SCAF4-202ENST00000399804 SYT2Q8N9I0 419 aaPredicted RBP15.27■□□□□ 0.04
SCAF4-202ENST00000399804 RABGGTAQ92696 567 aa15.27■□□□□ 0.04
SCAF4-202ENST00000399804 CAMKK2Q96RR4 588 aa15.27■□□□□ 0.04
SCAF4-202ENST00000399804 JPH1Q9HDC5 661 aaPredicted RBP15.27■□□□□ 0.04
SCAF4-202ENST00000399804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
SCAF4-202ENST00000399804 FAM86B1E9PN63 330 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 FAM86B2P0C5J1 330 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 SEPT7Q16181 437 aaKnown RBP15.27■□□□□ 0.03
SCAF4-202ENST00000399804 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 GSTA5Q7RTV2 222 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 APBB1IPQ7Z5R6 666 aaPredicted RBP15.27■□□□□ 0.03
SCAF4-202ENST00000399804 MSANTD4Q8NCY6 345 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 PNMA5Q96PV4 448 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 WDR24Q96S15 920 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.03
SCAF4-202ENST00000399804 ATP6V0A4Q9HBG4 840 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 SLC9A2Q9UBY0 812 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 DNAJC12Q9UKB3 198 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 PNMA3Q9UL41 463 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 ROBO3Q96MS0 1386 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 PITPNM2Q9BZ72 1349 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 FTCDO95954 541 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 PPP1R9AQ9ULJ8 1098 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 FZD1Q9UP38 647 aa15.27■□□□□ 0.03
SCAF4-202ENST00000399804 RSPH10B2B2RC85 870 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
SCAF4-202ENST00000399804 RSPH10BP0C881 870 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 PIK3CAP42336 1068 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
SCAF4-202ENST00000399804 PPP1R16BQ96T49 567 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 JPH2Q9BR39 696 aaPredicted RBP15.26■□□□□ 0.03
SCAF4-202ENST00000399804 ZNF233A6NK53 670 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 KLK7P49862 253 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 NPEPPSP55786 919 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 GFPT1Q06210 699 aaPredicted RBP15.26■□□□□ 0.03
SCAF4-202ENST00000399804 CYFIP1Q7L576 1253 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 ZBTB33Q86T24 672 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 KSR1Q8IVT5 923 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 NLRP4Q96MN2 994 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 POLR3CQ9BUI4 534 aaPredicted RBP15.26■□□□□ 0.03
SCAF4-202ENST00000399804 TSPYL1Q9H0U9 437 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 VPS18Q9P253 973 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 AKT3Q9Y243 479 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 ITIH6Q6UXX5 1313 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 OSTNP61366 133 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 PSMC6P62333 389 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 PPP1R7Q15435 360 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 CFAP58Q5T655 872 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 CDKAL1Q5VV42 579 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 TATDN1Q6P1N9 297 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 MTMR9Q96QG7 549 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 GINM1Q9NU53 330 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 JRKLQ9Y4A0 524 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
SCAF4-202ENST00000399804 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
SCAF4-202ENST00000399804 KCNJ6P48051 423 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
SCAF4-202ENST00000399804 PTK2Q05397 1052 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 NEDD9Q14511 834 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 PLA2G4FQ68DD2 849 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 RINT1Q6NUQ1 792 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 RUSC1Q9BVN2 902 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 ACTN2P35609 894 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAF4-202ENST00000399804 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 ADAT2Q7Z6V5 191 aaKnown RBP15.25■□□□□ 0.03
SCAF4-202ENST00000399804 CCDC25Q86WR0 208 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 UNC45AQ9H3U1 944 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 TFDP1Q14186 410 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 FRMD5Q7Z6J6 570 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 HOOK3Q86VS8 718 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 ADPGKQ9BRR6 497 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 KIAA1683Q9H0B3 1180 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 BLOC1S4Q9NUP1 217 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 ODF2LQ9ULJ1 636 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 NOD1Q9Y239 953 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
SCAF4-202ENST00000399804 SLC26A4O43511 780 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 TNNC2P02585 160 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 BRD3Q15059 726 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 DNAJC21Q5F1R6 531 aaKnown RBP15.24■□□□□ 0.03
SCAF4-202ENST00000399804 SH3BP5LQ7L8J4 393 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 ZNF668Q96K58 619 aaPredicted RBP15.24■□□□□ 0.03
SCAF4-202ENST00000399804 OPA1O60313 960 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 TFAMQ00059 246 aaKnown RBP15.24■□□□□ 0.03
SCAF4-202ENST00000399804 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms