RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 EDEM3Q9BZQ6 932 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 ARHGEF10LQ9HCE6 1279 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 FBXL5Q9UKA1 691 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 MRPL11Q9Y3B7 192 aaKnown RBP5.36□□□□□ -1.55
SMAD4-202ENST00000398417 ABCB11O95342 1321 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 GOLGA6L10A0A0M3HER8 536 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 GLI1P08151 1106 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC172P0C7W6 258 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CHRNA5P30532 468 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 PRELPP51888 382 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 SEC24CP53992 1094 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CETN1Q12798 172 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 DRAP1Q14919 205 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-202ENST00000398417 WDR93Q6P2C0 686 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 NLGN1Q8N2Q7 840 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 BAP1Q92560 729 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 FAM212AQ96EL1 285 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 RNPC3Q96LT9 517 aaKnown RBP5.36□□□□□ -1.55
SMAD4-202ENST00000398417 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-202ENST00000398417 PLAGL2Q9UPG8 496 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 SSU72P8A0A1W2PR75 194 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 DAPK3O43293 454 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 GUCY1A3Q02108 690 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CPLX4Q7Z7G2 160 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC50Q8IVM0 306 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 ACER1Q8TDN7 264 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 MASTLQ96GX5 879 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 AZI2Q9H6S1 392 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 TMOD4Q9NZQ9 345 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 RASAL2Q9UJF2 1139 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 A0A087WUV0 522 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-202ENST00000398417 GRID2IPA4D2P6 1211 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 LRRN2O75325 713 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 EYA4O95677 639 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 GAP43P17677 238 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 PDE6BP35913 854 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 PPP1R7Q15435 360 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 TRADDQ15628 312 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 NAB2Q15742 525 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 TTMPQ5BVD1 217 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 MEI1Q5TIA1 1274 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 LARGE2Q8N3Y3 721 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC114Q96M63 670 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 CELF4Q9BZC1 486 aaKnown RBP5.36□□□□□ -1.55
SMAD4-202ENST00000398417 PI4KBQ9UBF8 816 aa5.36□□□□□ -1.55
SMAD4-202ENST00000398417 M0R2N6 131 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 PGRMC1O00264 195 aaKnown RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ZBTB39O15060 712 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 HIP1RO75146 1068 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 RAD17O75943 681 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ARP10275 920 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 UCHL3P15374 230 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MNAT1P51948 309 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 GALCP54803 685 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC105Q8IYK2 499 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 LNX1Q8TBB1 728 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MGARPQ8TDB4 240 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CHURC1Q8WUH1 139 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 HAS1Q92839 578 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 DNAJC19Q96DA6 116 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 AMACRQ9UHK6 382 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 DISP2A7MBM2 1401 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 FGGP02679 453 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 VIMP08670 466 aaKnown RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 GCLMP48507 274 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MUM1L1Q5H9M0 696 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TMEM179Q6ZVK1 233 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 SYCE1Q8N0S2 351 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 PPM1KQ8N3J5 372 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 LRRC4BQ9NT99 713 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ATP8A1Q9Y2Q0 1164 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 KIF4AO95239 1232 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MMP10P09238 476 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MAP2K1Q02750 393 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 EPHA7Q15375 998 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 NLRP14Q86W24 1093 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CREG2Q8IUH2 290 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TRIM59Q8IWR1 403 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 PBKQ96KB5 322 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 GJD4Q96KN9 370 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 ACCSQ96QU6 501 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 POLRMTO00411 1230 aaKnown RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 C21orf2O43822 256 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 VPS41P49754 854 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 PTK2Q05397 1052 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 KCNA1Q09470 495 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 KRT27Q7Z3Y8 459 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 USP38Q8NB14 1042 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 VIPAS39Q9H9C1 493 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 GCNT4Q9P109 453 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 UTP11Q9Y3A2 253 aaKnown RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 TESPA1A2RU30 521 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 EML1O00423 815 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 PDXKO00764 312 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 MYCNP04198 464 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 EIF2AK2P19525 551 aaKnown RBP5.35□□□□□ -1.55
SMAD4-202ENST00000398417 IRAK1P51617 712 aa5.35□□□□□ -1.55
SMAD4-202ENST00000398417 CASP5P51878 434 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms