RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 LRWD1Q9UFC0 647 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 AP4S1Q9Y587 144 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 KDRP35968 1356 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
TRPS1-203ENST00000395715 CYP4A11Q02928 519 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 MAPRE2Q15555 327 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 RABGAP1LQ5R372 815 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 CYP4A22Q5TCH4 519 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 GLMNQ92990 594 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PLEKHA8Q96JA3 519 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 GINM1Q9NU53 330 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PIK3R4Q99570 1358 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 SLC25A24Q6NUK1 477 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 TERB1Q8NA31 727 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 TINF2Q9BSI4 451 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 MSH6P52701 1360 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 A0A0B4J269 797 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 CCDC195A0A1B0GUA6 201 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PGM1P36871 562 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 TUBB3Q13509 450 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 CABP7Q86V35 215 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 SYNCRIPO60506 623 aaKnown RBP8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PTPREP23469 700 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 RPS6P62753 249 aaKnown RBP8.53□□□□□ -1.04
TRPS1-203ENST00000395715 CCDC81Q6ZN84 652 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 UXS1Q8NBZ7 420 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 VPS37AQ8NEZ2 397 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 DTX3LQ8TDB6 740 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 RSPH1Q8WYR4 309 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 CFAP99D6REC4 459 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PTK2Q05397 1052 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 PLEKHA7Q6IQ23 1121 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 RNF14Q9UBS8 474 aa8.53□□□□□ -1.04
TRPS1-203ENST00000395715 ARMCX3Q9UH62 379 aaPredicted RBP8.53□□□□□ -1.04
TRPS1-203ENST00000395715 SAC3D1A6NKF1 404 aa8.52□□□□□ -1.04
TRPS1-203ENST00000395715 MYCLP12524 364 aaPredicted RBP8.52□□□□□ -1.04
TRPS1-203ENST00000395715 PHKA1P46020 1223 aa8.52□□□□□ -1.04
TRPS1-203ENST00000395715 C10orf76Q5T2E6 689 aa8.52□□□□□ -1.04
TRPS1-203ENST00000395715 RASSF5Q8WWW0 418 aa8.52□□□□□ -1.04
TRPS1-203ENST00000395715 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 MYBL1P10243 752 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 LRPAP1P30533 357 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 FLT3P36888 993 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 LIG4P49917 911 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 SHROOM1Q2M3G4 852 aaPredicted RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 FAM129AQ9BZQ8 928 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 EMC3Q9P0I2 261 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 RWDD2AQ9UIY3 292 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 MYO1GB0I1T2 1018 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 GYS1P13807 737 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 DDX5P17844 614 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 USH1GQ495M9 461 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 MYOCDQ8IZQ8 938 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 PDIK1LQ8N165 341 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 ULK4Q96C45 1275 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 GOLPH3LQ9H4A5 285 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 SERPINB13Q9UIV8 391 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 C9orf84Q5VXU9 1444 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 SMARCA4P51532 1647 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 H7C0S8 307 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 BAIAP3O94812 1187 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 PAPOLAP51003 745 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 NR1H3Q13133 447 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 COG2Q14746 738 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 RBBP7Q16576 425 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 IFNL2Q8IZJ0 200 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 FAM45AQ8TCE6 357 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 EML4Q9HC35 981 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 DLGAP2Q9P1A6 1054 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 ADAM30Q9UKF2 790 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 TARSL2A2RTX5 802 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 DLATP10515 647 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 GYS2P54840 703 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 UBE2Q1Q7Z7E8 422 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 CFAP69A5D8W1 941 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 PIK3R2O00459 728 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 FAM107AO95990 144 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 RPS6KB1P23443 525 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 GPR141Q7Z602 305 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 CTIFO43310 598 aaKnown RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 PNMA6AP0CW24 399 aaPredicted RBP8.52□□□□□ -1.05
TRPS1-203ENST00000395715 ARFIP2P53365 341 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 FAM133AQ8N9E0 248 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 CASS4Q9NQ75 786 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 MCM8Q9UJA3 840 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 TRIM17Q9Y577 477 aa8.52□□□□□ -1.05
TRPS1-203ENST00000395715 FAM83GA6ND36 823 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 H7C1D1 291 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 MYO1DO94832 1006 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 BTKQ06187 659 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 SLC12A6Q9UHW9 1150 aa8.51□□□□□ -1.05
TRPS1-203ENST00000395715 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms