RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 EPB41P11171 864 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 ALAS1P13196 640 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 EPS15P42566 896 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 USP14P54578 494 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 APBA1Q02410 837 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 DGKZQ13574 1117 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 MTMR2Q13614 643 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 BRD3Q15059 726 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 SMAP1Q8IYB5 467 aaPredicted RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 CPXCR1Q8N123 301 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 HNRNPLLQ8WVV9 542 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 MKNK1Q9BUB5 465 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 AGO4Q9HCK5 861 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 JADE2Q9NQC1 790 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 CNOT7Q9UIV1 285 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 ZNF112Q9UJU3 913 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 JRKLQ9Y4A0 524 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 GTPBP10A4D1E9 387 aaKnown RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 PPP1R37O75864 691 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 LYPLA2O95372 231 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 PON1P27169 355 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 MAGEA1P43355 309 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 CASP4P49662 377 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 GFPT1Q06210 699 aaPredicted RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 MAPK7Q13164 816 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 ITGB3BPQ13352 177 aaPredicted RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 NBPF12Q5TAG4 269 aaPredicted RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 KLHDC7AQ5VTJ3 777 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 DAW1Q8N136 415 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 TXLNBQ8N3L3 684 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 CAPN6Q9Y6Q1 641 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 COL11A1P12107 1806 aaPredicted RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 TACC1O75410 805 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 TBC1D8O95759 1140 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 P4HBP07237 508 aaKnown RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 UCHL3P15374 230 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 PRLRP16471 622 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 RPS6P62753 249 aaKnown RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 EXOC3L4Q17RC7 722 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 ZC2HC1CQ53FD0 456 aaPredicted RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 TDRD12Q587J7 1177 aaKnown RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 STXBP4Q6ZWJ1 553 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 MIER3Q7Z3K6 550 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 FAM178BQ8IXR5 827 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 NOA1Q8NC60 698 aaKnown RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 RPAP3Q9H6T3 665 aaPredicted RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 ARFGAP3Q9NP61 516 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 DMAC2Q9NW81 257 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 DBR1Q9UK59 544 aaKnown RBP9.93□□□□□ -0.82
TDP1-202ENST00000393452 CD2APQ9Y5K6 639 aa9.93□□□□□ -0.82
TDP1-202ENST00000393452 PHIPQ8WWQ0 1821 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 VWA5AO00534 786 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 CLIC2O15247 247 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SEC31AO94979 1220 aaKnown RBP9.92□□□□□ -0.82
TDP1-202ENST00000393452 TUBBP07437 444 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SLC9A1P19634 815 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 BACE1P56817 501 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 MTMR1Q13613 665 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 PGM5Q15124 567 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SLC18A3Q16572 532 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 TBC1D10BQ4KMP7 808 aaPredicted RBP9.92□□□□□ -0.82
TDP1-202ENST00000393452 ODR4Q5SWX8 454 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SCYL3Q8IZE3 742 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 RNF10Q8N5U6 811 aaKnown RBP9.92□□□□□ -0.82
TDP1-202ENST00000393452 TAAR1Q96RJ0 339 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 PNKPQ96T60 521 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 MMS19Q96T76 1030 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 MLXIPQ9HAP2 919 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 TBC1D22BQ9NU19 505 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SALL4Q9UJQ4 1053 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 BCS1LQ9Y276 419 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 ZHX2Q9Y6X8 837 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 ARHGEF35A5YM69 484 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SRGAP2O75044 1071 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 ZBED4O75132 1171 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 HIP1RO75146 1068 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 ACTN1P12814 892 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 PSMC2P35998 433 aaKnown RBP9.92□□□□□ -0.82
TDP1-202ENST00000393452 SPP2Q13103 211 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 RAPGEF1Q13905 1077 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 PADI6Q6TGC4 694 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 GBP6Q6ZN66 633 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 IRF2BP2Q7Z5L9 587 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SLC9A9Q8IVB4 645 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 TMEM174Q8WUU8 243 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 C12orf42Q96LP6 360 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 IKZF4Q9H2S9 585 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SIX2Q9NPC8 291 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 AGPAT3Q9NRZ7 376 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 HOMER2Q9NSB8 354 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 SNX12Q9UMY4 172 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
TDP1-202ENST00000393452 DDX39AO00148 427 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms