RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ELL2O00472 640 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 NFIBO00712 420 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TSPAN6O43657 245 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PRPF6O94906 941 aaKnown RBP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 SCGB1D2O95969 90 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 CYP2C8P10632 490 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 ATF2P15336 505 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 ENPP1P22413 925 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 MC3RP41968 323 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 CDR1P51861 262 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PFKPQ01813 784 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 SLC6A3Q01959 620 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 ROM1Q03395 351 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PPP2R5AQ15172 486 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 LRRC41Q15345 812 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PCBP2Q15366 365 aaKnown RBP eCLIP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TARBP2Q15633 366 aaKnown RBP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PRAMEF9Q5VWM5 478 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 SLFN12LQ6IEE8 588 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PGM2L1Q6PCE3 622 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TMC5Q6UXY8 1006 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 PRR23BQ6ZRT6 265 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 KANSL1Q7Z3B3 1105 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 B3GNT8Q7Z7M8 397 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 LDHDQ86WU2 507 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 DTX3Q8N9I9 347 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 IGDCC4Q8TDY8 1250 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TGFBRAP1Q8WUH2 860 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TSR2Q969E8 191 aaKnown RBP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 CAMKK2Q96RR4 588 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TUBGCP5Q96RT8 1024 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 DIRC2Q96SL1 478 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 MYL10Q9BUA6 226 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 AMNQ9BXJ7 453 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 MCOLN1Q9GZU1 580 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 NSUN3Q9H649 340 aaKnown RBP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 INCENPQ9NQS7 918 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 SIRT5Q9NXA8 310 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 MKS1Q9NXB0 559 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 GALNT8Q9NY28 637 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 FAM53CQ9NYF3 392 aa4.18□□□□□ -1.74
PTPRC-205ENST00000391970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-205ENST00000391970 TEX51A0A1B0GUA7 166 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA12O60330 932 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 CLEC2LP0C7M8 214 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 IGFBP6P24592 240 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 RGS3P49796 1198 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 IRAK1P51617 712 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 NCKAP1LP55160 1127 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 ADCY2Q08462 1091 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 SKIDA1Q1XH10 827 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 HSP90AB2PQ58FF8 381 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 CT83Q5H943 113 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 TMEM240Q5SV17 173 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 CCDC181Q5TID7 509 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 KIAA1841Q6NSI8 718 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 TIGD7Q6NT04 549 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 LRSAM1Q6UWE0 723 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 AMOTL1Q8IY63 956 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 SMARCC2Q8TAQ2 1214 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 CALML6Q8TD86 181 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 MZB1Q8WU39 189 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 FERMT2Q96AC1 680 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 TMEM209Q96SK2 561 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 SYT3Q9BQG1 590 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 ANO3Q9BYT9 981 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 RHOBTB2Q9BYZ6 727 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 WNT8AQ9H1J5 351 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDH18Q9HCL0 1135 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 TCF7L1Q9HCS4 588 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 DCP1AQ9NPI6 582 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 LUC7LQ9NQ29 371 aaKnown RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 DLL4Q9NR61 685 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 KCNG1Q9UIX4 513 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 LUC7L2Q9Y383 392 aaKnown RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA9Q9Y5G4 932 aaKnown RBP4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA8Q9Y5G5 932 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA7Q9Y5G6 932 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA6Q9Y5G7 932 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA3Q9Y5H0 932 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 PCDHGA2Q9Y5H1 932 aa4.17□□□□□ -1.74
PTPRC-205ENST00000391970 ST20-MTHFSA0A0A6YYL1 179 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 PRSS38A1L453 326 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 SEMA7AO75326 666 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 APOL3O95236 402 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 PFKLP17858 780 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 CCND1P24385 295 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 ECE1P42892 770 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 RECQLP46063 649 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-205ENST00000391970 MTNR1BP49286 362 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 EPHB3P54753 998 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 ITGA1P56199 1179 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 SRSF2Q01130 221 aaKnown RBP4.16□□□□□ -1.74
PTPRC-205ENST00000391970 ODF1Q14990 250 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 STILQ15468 1287 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 MLANAQ16655 118 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 UGT8Q16880 541 aa4.16□□□□□ -1.74
PTPRC-205ENST00000391970 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTPRC-205ENST00000391970 PITRM1Q5JRX3 1037 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms