RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 STAM2O75886 525 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 RNF8O76064 485 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.139e-7■■■■■ 33.9
PTPRN2-202ENST00000389416 NTRK3Q16288 839 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 CRY2Q49AN0 593 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 MFSD14CQ5VZR4 134 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 GPRC5AQ8NFJ5 357 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 KCNH7Q9NS40 1196 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 TYW1Q9NV66 732 aaKnown RBP14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 SEL1LQ9UBV2 794 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 FAM169AQ9Y6X4 670 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 LPXNO60711 386 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 VEGFAP15692 232 aaPredicted RBP14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 SLC35F6Q8N357 371 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 TSC1Q92574 1164 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 MXRA8Q9BRK3 442 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 HYOU1Q9Y4L1 999 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 GNAT1P11488 350 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 TAL1P17542 331 aaPredicted RBP14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 VCAM1P19320 739 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 UAP1Q16222 522 aaPredicted RBP14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 PPP1R21Q6ZMI0 780 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 IDI2Q9BXS1 227 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 SNX25Q9H3E2 840 aa14.23□□□□□ -0.13
PTPRN2-202ENST00000389416 LDHAP00338 332 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 ICAM1P05362 532 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 ATP2A2P16615 1042 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 RHBDL3P58872 404 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 TKFCQ3LXA3 575 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 EP400NLQ6ZTU2 488 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 PROM2Q8N271 834 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 RNF149Q8NC42 400 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 MRC1P22897 1456 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 LGALS16A8MUM7 142 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 TBX3O15119 743 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 HOXA7P31268 230 aaPredicted RBP14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 SELENOSQ9BQE4 189 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 GLIS2Q9BZE0 524 aaPredicted RBP14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 TUFT1Q9NNX1 390 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 TEX33O43247 280 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 SLC37A4O43826 429 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 C6orf222P0C671 652 aaPredicted RBP14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 HOXD10P28358 340 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 PPP2R5DQ14738 602 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 NAALADL2Q58DX5 795 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 TMEM143Q96AN5 459 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 INPP5FQ9Y2H2 1132 aa14.22□□□□□ -0.13
PTPRN2-202ENST00000389416 MYMKA6NI61 221 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 KRIT1O00522 736 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 SLC25A27O95847 323 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 TRIM49P0CI25 452 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 TRIM49CP0CI26 452 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 STK4Q13043 487 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 HADHQ16836 314 aaKnown RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 XKR3Q5GH77 459 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 PLA2G4FQ68DD2 849 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 IFT20Q8IY31 132 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 GPR161Q8N6U8 529 aaKnown RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 PPP1R13BQ96KQ4 1090 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 ADM5C9JUS6 153 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 MYO1EQ12965 1108 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 CCDC63Q8NA47 563 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 OR6J1Q8NGC5 347 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 NHEJ1Q9H9Q4 299 aaPredicted RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 TCP1P17987 556 aaKnown RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 ARL1P40616 181 aaPredicted RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 ARPP19P56211 112 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 RNF187Q5TA31 235 aaPredicted RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 RAET1EQ8TD07 263 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 DPF2Q92785 391 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 GMCL1Q96IK5 515 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 CEP63Q96MT8 703 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 RAB20Q9NX57 234 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 DNAJC12Q9UKB3 198 aa14.21□□□□□ -0.13
PTPRN2-202ENST00000389416 GAS8O95995 478 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 NPEPPSP55786 919 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 KRT81Q14533 505 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 SURF1Q15526 300 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 ANKRD40Q6AI12 368 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 GPC2Q8N158 579 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 CHST13Q8NET6 341 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 ATRIPQ8WXE1 791 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 MIS12Q9H081 205 aa14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 GBA2Q9HCG7 927 aaPredicted RBP14.21□□□□□ -0.14
PTPRN2-202ENST00000389416 NDUFA10O95299 355 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 PPARDQ03181 441 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 ERCC6LQ2NKX8 1250 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 KAZNQ674X7 775 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 REEP2Q9BRK0 252 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 BSPRYQ5W0U4 402 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 C15orf52Q6ZUT6 534 aaKnown RBP14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 FAM198AQ9UFP1 575 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms