RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CTAGE4Q8IX94 777 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 UBE2Q2Q8WVN8 375 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 EDEM3Q9BZQ6 932 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 TSGA10Q9BZW7 698 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 CENPFP49454 3210 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 ENC1O14682 589 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 CA12O43570 354 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 CHMP2AO43633 222 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
HMGCL-202ENST00000374487 NR2F2P24468 414 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 BACE1P56817 501 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 UBXN2AP68543 259 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 SFR1Q86XK3 245 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
HMGCL-202ENST00000374487 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
HMGCL-202ENST00000374487 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 IFIH1Q9BYX4 1025 aaKnown RBP13.31□□□□□ -0.28
HMGCL-202ENST00000374487 LACRTQ9GZZ8 138 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 MACROD2A1Z1Q3 448 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 EML1O00423 815 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 EYA4O95677 639 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 ZSCAN20P17040 1043 aaPredicted RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 CASP5P51878 434 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 KIF11P52732 1056 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 VAV2P52735 878 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 KNOP1Q1ED39 458 aaKnown RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 OTOP1Q7RTM1 612 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 TRIM59Q8IWR1 403 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 WDR18Q9BV38 432 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 NLRC4Q9NPP4 1024 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 PRDM10Q9NQV6 1147 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 FBXO28Q9NVF7 368 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 PLA2G6O60733 806 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 GAS7O60861 476 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 MARSP56192 900 aaKnown RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 CEP55Q53EZ4 464 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 ANKRD23Q86SG2 305 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 SECISBP2LQ93073 1101 aaKnown RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 NUCKS1Q9H1E3 243 aaKnown RBP13.3□□□□□ -0.28
HMGCL-202ENST00000374487 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 DUSP10Q9Y6W6 482 aa13.3□□□□□ -0.28
HMGCL-202ENST00000374487 PTPRFP10586 1907 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
HMGCL-202ENST00000374487 TFRCP02786 760 aaKnown RBP13.29□□□□□ -0.28
HMGCL-202ENST00000374487 PNMA6AP0CW24 399 aaPredicted RBP13.29□□□□□ -0.28
HMGCL-202ENST00000374487 CTGFP29279 349 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 AMPD2Q01433 879 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 PDXDC1Q6P996 788 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 BAP1Q92560 729 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 ZNF577Q9BSK1 485 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 RUSC1Q9BVN2 902 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 LSM14BQ9BX40 385 aaKnown RBP13.29□□□□□ -0.28
HMGCL-202ENST00000374487 AS3MTQ9HBK9 375 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 CEP72Q9P209 647 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 FHOD1Q9Y613 1164 aa13.29□□□□□ -0.28
HMGCL-202ENST00000374487 HTTP42858 3142 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 RSPH10B2B2RC85 870 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 PSMD10O75832 226 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 PRPF6O94906 941 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SLITRK3O94933 977 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SEC31AO94979 1220 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ZRANB2O95218 330 aaKnown RBP eCLIP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 GCNT3O95395 438 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ALDH1A1P00352 501 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ATP1A1P05023 1023 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 RSPH10BP0C881 870 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 MYBP10242 640 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 POLR2FP61218 127 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 PPP2R5CQ13362 524 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 TDRD12Q587J7 1177 aaKnown RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 CC2D1AQ6P1N0 951 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SLC30A10Q6XR72 485 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 TRAPPC11Q7Z392 1133 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 DYDC2Q96IM9 177 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 ARMCX3Q9UH62 379 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-202ENST00000374487 AGTPBP1Q9UPW5 1226 aa13.28□□□□□ -0.28
HMGCL-202ENST00000374487 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms