RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 NEK1Q96PY6 1258 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 ERVK-5Q9HDB9 667 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 FAM217BQ9NTX9 383 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 BARHL2Q9NY43 387 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 GINS2Q9Y248 185 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 NOC2LQ9Y3T9 749 aaKnown RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 PCDHGC5Q9Y5F6 944 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 ZBTB42B2RXF5 422 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 FAM86B1E9PN63 330 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 hCG_1984214I3L0E3 225 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 BACH1O14867 736 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 DHX15O43143 795 aaKnown RBP15.7■□□□□ 0.1
CXCL12-202ENST00000374426 ZBTB43O43298 467 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 GLP2RO95838 553 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 FAM86B2P0C5J1 330 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-202ENST00000374426 NRIP1P48552 1158 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 RBM23Q86U06 439 aaKnown RBP15.7■□□□□ 0.1
CXCL12-202ENST00000374426 ALYREFQ86V81 257 aaKnown RBP15.7■□□□□ 0.1
CXCL12-202ENST00000374426 ZNF713Q8N859 430 aaPredicted RBP15.7■□□□□ 0.1
CXCL12-202ENST00000374426 CRYGNQ8WXF5 182 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 LRFN2Q9ULH4 789 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 PCDHB7Q9Y5E2 793 aa15.7■□□□□ 0.1
CXCL12-202ENST00000374426 IGLV3-22A0A075B6J6 115 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 PPFIA3O75145 1194 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 RPS6KA5O75582 802 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 ATP4AP20648 1035 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 CDC27P30260 824 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 ZNF76P36508 570 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 COASYQ13057 564 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 ADCK5Q3MIX3 580 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 RNF20Q5VTR2 975 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 FAM160B1Q5W0V3 765 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 PDXDC2PQ6P474 469 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 DHX32Q7L7V1 743 aaKnown RBP15.69■□□□□ 0.1
CXCL12-202ENST00000374426 PLA2G4DQ86XP0 818 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 RASEFQ8IZ41 740 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 FBXL18Q96ME1 805 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 ADAM2Q99965 735 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 GLT8D2Q9H1C3 349 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 ZNF302Q9NR11 478 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 RGS18Q9NS28 235 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 BARX2Q9UMQ3 279 aaPredicted RBP15.69■□□□□ 0.1
CXCL12-202ENST00000374426 ST3GAL5Q9UNP4 418 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 COL1A2P08123 1366 aa15.69■□□□□ 0.1
CXCL12-202ENST00000374426 PLXNA4Q9HCM2 1894 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 DENND3A2RUS2 1198 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 GOLGA8AA7E2F4 631 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 TBKBP1A7MCY6 615 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 C9IYK1 514 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 IPO5O00410 1097 aaKnown RBP15.68■□□□□ 0.1
CXCL12-202ENST00000374426 NHLH1Q02575 133 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 KIZQ2M2Z5 673 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 ZNF484Q5JVG2 852 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 FAM102BQ5T8I3 360 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 JAKMIP3Q5VZ66 844 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 SWSAP1Q6NVH7 229 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 MIS18BP1Q6P0N0 1132 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 FAM43BQ6ZT52 329 aaPredicted RBP15.68■□□□□ 0.1
CXCL12-202ENST00000374426 SLC24A5Q71RS6 500 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 KCNH6Q9H252 994 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 C1orf112Q9NSG2 853 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 HCSTQ9UBK5 93 aa15.68■□□□□ 0.1
CXCL12-202ENST00000374426 EVPLQ92817 2033 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 CACNA1HO95180 2353 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 KLF18A0A0U1RQI7 1052 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 ADAMTS3O15072 1205 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 GPR182O15218 404 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 C22orf31O95567 290 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 CYP3A4P08684 503 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 UBE3AQ05086 875 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 TSGA10IPQ3SY00 556 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 FAM228AQ86W67 206 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 EDAQ92838 391 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 PPP1R16BQ96T49 567 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 OSMRQ99650 979 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 TLE6Q9H808 572 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 USP15Q9Y4E8 981 aaPredicted RBP15.67■□□□□ 0.1
CXCL12-202ENST00000374426 PCDHB12Q9Y5F1 795 aa15.67■□□□□ 0.1
CXCL12-202ENST00000374426 FNDC1Q4ZHG4 1894 aaPredicted RBP15.67■□□□□ 0.1
CXCL12-202ENST00000374426 LOC730098B7Z3J9 87 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 PER2O15055 1255 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 GPR32O75388 356 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 FGF18O76093 207 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 VTNP04004 478 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 FGFR1P11362 822 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 ADD1P35611 737 aaKnown RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 MRE11P49959 708 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 CRYBB1P53674 252 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 RCAN1P53805 252 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 ERVFC1P60507 584 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 FAM189BP81408 668 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 RBM10P98175 930 aaKnown RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 CBX2Q14781 532 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 PFKFB3Q16875 520 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 ODR4Q5SWX8 454 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 SPOUT1Q5T280 376 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms