RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CCDC43Q96MW1 224 aaKnown RBP27.53■■■□□ 2
CTSA-203ENST00000372459 FIZ1Q96SL8 496 aa27.53■■■□□ 2
CTSA-203ENST00000372459 BTBD7Q9P203 1132 aa27.53■■■□□ 2
CTSA-203ENST00000372459 ASTN1O14525 1302 aa27.53■■■□□ 2
CTSA-203ENST00000372459 MEA1Q16626 185 aa27.52■■■□□ 2
CTSA-203ENST00000372459 MOV10L1Q9BXT6 1211 aaKnown RBP27.52■■■□□ 2
CTSA-203ENST00000372459 MMRN2Q9H8L6 949 aa27.52■■■□□ 2
CTSA-203ENST00000372459 PFASO15067 1338 aa27.52■■■□□ 2
CTSA-203ENST00000372459 PHLPP2Q6ZVD8 1323 aa27.52■■■□□ 2
CTSA-203ENST00000372459 RGS20O76081 388 aa27.51■■■□□ 2
CTSA-203ENST00000372459 KCNA2P16389 499 aa27.51■■■□□ 2
CTSA-203ENST00000372459 PPIL2Q13356 520 aa27.51■■■□□ 2
CTSA-203ENST00000372459 FRMD5Q7Z6J6 570 aa27.51■■■□□ 2
CTSA-203ENST00000372459 KCNH4Q9UQ05 1017 aa27.51■■■□□ 2
CTSA-203ENST00000372459 PCDHA10Q9Y5I2 948 aa27.51■■■□□ 2
CTSA-203ENST00000372459 NR3C1P04150 777 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 MAPK7Q13164 816 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 UGCGQ16739 394 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 ARMC9Q7Z3E5 817 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 SMAP1Q8IYB5 467 aaPredicted RBP27.51■■□□□ 1.99
CTSA-203ENST00000372459 CHP1Q99653 195 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 DNAI1Q9UI46 699 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 PCDHB13Q9Y5F0 798 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 NFASCO94856 1347 aa27.51■■□□□ 1.99
CTSA-203ENST00000372459 KCNA1Q09470 495 aa27.5■■□□□ 1.99
CTSA-203ENST00000372459 GPR162Q16538 588 aa27.5■■□□□ 1.99
CTSA-203ENST00000372459 EAPPQ56P03 285 aaPredicted RBP27.5■■□□□ 1.99
CTSA-203ENST00000372459 WDR59Q6PJI9 974 aa27.5■■□□□ 1.99
CTSA-203ENST00000372459 TIPINQ9BVW5 301 aa27.5■■□□□ 1.99
CTSA-203ENST00000372459 FAM207AQ9NSI2 230 aaPredicted RBP27.5■■□□□ 1.99
CTSA-203ENST00000372459 KIAA1217Q5T5P2 1943 aa27.5■■□□□ 1.99
CTSA-203ENST00000372459 MYH11P35749 1972 aa27.5■■□□□ 1.99
CTSA-203ENST00000372459 IQCA1LA6NCM1 817 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 SLC16A3O15427 465 aaKnown RBP27.49■■□□□ 1.99
CTSA-203ENST00000372459 NFIL3Q16649 462 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 ZC2HC1CQ53FD0 456 aaPredicted RBP27.49■■□□□ 1.99
CTSA-203ENST00000372459 DAW1Q8N136 415 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 SPATC1LQ9H0A9 340 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 TAF1DQ9H5J8 278 aaPredicted RBP27.49■■□□□ 1.99
CTSA-203ENST00000372459 LARSQ9P2J5 1176 aaKnown RBP27.49■■□□□ 1.99
CTSA-203ENST00000372459 AGTPBP1Q9UPW5 1226 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 PPP2R3AQ06190 1150 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 STXBP2Q15833 593 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 NEK11Q8NG66 645 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 METTL14Q9HCE5 456 aaKnown RBP27.49■■□□□ 1.99
CTSA-203ENST00000372459 ANKEF1Q9NU02 776 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 ARMCX3Q9UH62 379 aaPredicted RBP27.49■■□□□ 1.99
CTSA-203ENST00000372459 LCTP09848 1927 aa27.49■■□□□ 1.99
CTSA-203ENST00000372459 ZMYM2Q9UBW7 1377 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 TGFB1I1O43294 461 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 SMCR8Q8TEV9 937 aaPredicted RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 EDEM3Q9BZQ6 932 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 ASCC2Q9H1I8 757 aaPredicted RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 JPH1Q9HDC5 661 aaPredicted RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 EPN1Q9Y6I3 576 aaPredicted RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 SCN4AP35499 1836 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 SPATA31C2B4DYI2 1134 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 USO1O60763 962 aaKnown RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 DKC1O60832 514 aaKnown RBP eCLIP27.48■■□□□ 1.99
CTSA-203ENST00000372459 NDUFA10O95299 355 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 MAPTP10636 758 aaKnown RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 EPB41P11171 864 aaKnown RBP27.48■■□□□ 1.99
CTSA-203ENST00000372459 PDCL2Q8N4E4 241 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 ACRBPQ8NEB7 543 aa27.48■■□□□ 1.99
CTSA-203ENST00000372459 HERVK_113P62684 666 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 CDK17Q00537 523 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 KCNMA1Q12791 1236 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 MAEAQ7L5Y9 396 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 NCAPG2Q86XI2 1143 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 CCDC155Q8N6L0 562 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 OPTNQ96CV9 577 aa27.47■■□□□ 1.99
CTSA-203ENST00000372459 EPHB6O15197 1021 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 CLIC2O15247 247 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 PEX10O60683 326 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 EIF3JO75822 258 aaKnown RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 GNG11P61952 73 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 NCBP1Q09161 790 aaKnown RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 KCNH2Q12809 1159 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 UTP14CQ5TAP6 766 aaKnown RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 HS2ST1Q7LGA3 356 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 ATP6V0A1Q93050 837 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 STRA6Q9BX79 667 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 LZTFL1Q9NQ48 299 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 SLC9A2Q9UBY0 812 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 BACH1O14867 736 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 AKAP3O75969 853 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 PSAPP07602 524 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 HNRNPH3P31942 346 aaKnown RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 ALDH5A1P51649 535 aaPredicted RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 CNTN2Q02246 1040 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 ALCAMQ13740 583 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 FASTKD5Q7L8L6 764 aaKnown RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 PNMA8AQ86V59 439 aaPredicted RBP27.46■■□□□ 1.99
CTSA-203ENST00000372459 DRC1Q96MC2 740 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 PAGR1Q9BTK6 254 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 PLAGL2Q9UPG8 496 aa27.46■■□□□ 1.99
CTSA-203ENST00000372459 K7ENM7 598 aa27.45■■□□□ 1.98
CTSA-203ENST00000372459 PLS3P13797 630 aa27.45■■□□□ 1.98
CTSA-203ENST00000372459 CYLC1P35663 651 aaPredicted RBP27.45■■□□□ 1.98
CTSA-203ENST00000372459 XKR9Q5GH70 373 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms