RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 A1CFQ9NQ94 594 aaKnown RBP8.22□□□□□ -1.09
BRCC3-203ENST00000369459 ZDHHC9Q9Y397 364 aa8.22□□□□□ -1.09
BRCC3-203ENST00000369459 H7C1D1 291 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 KPNA6O60684 536 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 F13A1P00488 732 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 HSPA8P11142 646 aaKnown RBP8.21□□□□□ -1.09
BRCC3-203ENST00000369459 KRT10P13645 584 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 SLC16A2P36021 539 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 SEC13P55735 322 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 AP2B1P63010 937 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 NFIAQ12857 509 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 PICALMQ13492 652 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 KCT2Q8NC54 265 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 ACMSDQ8TDX5 336 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 DYNLL2Q96FJ2 89 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 CLMNQ96JQ2 1002 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 NAP1L3Q99457 506 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-203ENST00000369459 TDRD3Q9H7E2 651 aaKnown RBP8.21□□□□□ -1.09
BRCC3-203ENST00000369459 IL17RBQ9NRM6 502 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 FAM217BQ9NTX9 383 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-203ENST00000369459 NYAP2Q9P242 653 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 PGAP2Q9UHJ9 254 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 MTMR6Q9Y217 621 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 ZNF510Q9Y2H8 683 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 TRIM17Q9Y577 477 aa8.21□□□□□ -1.09
BRCC3-203ENST00000369459 SPDYE3A6NKU9 549 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 WNT10BO00744 389 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 PRPF3O43395 683 aaKnown RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 ARIH2O95376 493 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 DEXIO95424 95 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 EPB42P16452 691 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 TNFAIP3P21580 790 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 CD9P21926 228 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 GMPSP49915 693 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 SSRP1Q08945 709 aaKnown RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 STK3Q13188 491 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 SUZ12Q15022 739 aaKnown RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 TMEM179Q6ZVK1 233 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 CRACR2BQ8N4Y2 399 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 TMEM87AQ8NBN3 555 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 NKX2-3Q8TAU0 364 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 SRRTQ9BXP5 876 aaKnown RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 MTMR4Q9NYA4 1195 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 GPRC5DQ9NZD1 345 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 ZC3H7BQ9UGR2 993 aaKnown RBP8.21□□□□□ -1.1
BRCC3-203ENST00000369459 PHIPQ8WWQ0 1821 aa8.21□□□□□ -1.1
BRCC3-203ENST00000369459 IQCA1LA6NCM1 817 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 STK25O00506 426 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 TTLL1O95922 423 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 VIMP08670 466 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 YY1P25490 414 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 MCM4P33991 863 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 GPS2Q13227 327 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 SKOR2Q2VWA4 1001 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 BBS9Q3SYG4 887 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 ARHGAP22Q7Z5H3 698 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 TTC39CQ8N584 583 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 TRIML2Q8N7C3 387 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 MAML1Q92585 1016 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 L3MBTL3Q96JM7 780 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 C8orf76Q96K31 380 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 MRPL46Q9H2W6 279 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 KANSL2Q9H9L4 492 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 GPHNQ9NQX3 736 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 CNOT7Q9UIV1 285 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 MCM8Q9UJA3 840 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 FBXO2Q9UK22 296 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 DDTLA6NHG4 134 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 ATP9BO43861 1147 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 NMT2O60551 498 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 PRDM1O75626 825 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 IL33O95760 270 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 KRT18P05783 430 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 SNHG28P0DPA3 235 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 INHBCP55103 352 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 ASPRV1Q53RT3 343 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 FAM133BQ5BKY9 247 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 THOC7Q6I9Y2 204 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 TMTC3Q6ZXV5 915 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 MICALL2Q8IY33 904 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 PNMA1Q8ND90 353 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 NAF1Q96HR8 494 aaKnown RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 FNBP1Q96RU3 617 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 ORC3Q9UBD5 711 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-203ENST00000369459 TUBGCP4Q9UGJ1 667 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 TTLL3Q9Y4R7 772 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 ZNF541Q9H0D2 1346 aa8.2□□□□□ -1.1
BRCC3-203ENST00000369459 FDPSP14324 419 aaKnown RBP8.19□□□□□ -1.1
BRCC3-203ENST00000369459 TMOD1P28289 359 aa8.19□□□□□ -1.1
BRCC3-203ENST00000369459 CTHP32929 405 aa8.19□□□□□ -1.1
BRCC3-203ENST00000369459 TUFMP49411 452 aaKnown RBP8.19□□□□□ -1.1
BRCC3-203ENST00000369459 TUBA1BP68363 451 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms