RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ZKSCAN4Q969J2 545 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 PURBQ96QR8 312 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 PDCD2LQ9BRP1 358 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 MKNK1Q9BUB5 465 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 PLCB1Q9NQ66 1216 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 RNF146Q9NTX7 359 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 ADAMTS5Q9UNA0 930 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 KIAA1217Q5T5P2 1943 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 SFI1A8K8P3 1242 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 ZBTB39O15060 712 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 SERPING1P05155 500 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 MAPTP10636 758 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 NMT1P30419 496 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 SFNP31947 248 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 QARSP47897 775 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 ITGB3BPQ13352 177 aaPredicted RBP20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 SUPT20HL1Q3ZLR7 823 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 SLC9C1Q4G0N8 1177 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 ARHGEF16Q5VV41 709 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 PADI6Q6TGC4 694 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 NSMFQ6X4W1 530 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 HS2ST1Q7LGA3 356 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 TIPINQ9BVW5 301 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 IFIH1Q9BYX4 1025 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 TMOD4Q9NZQ9 345 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 PCDHA13Q9Y5I0 950 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 ZHX2Q9Y6X8 837 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 ZMYM2Q9UBW7 1377 aa20.09■□□□□ 0.81
PDLIM7-203ENST00000359895 LOC285556D6RIA3 1793 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 TGFB1I1O43294 461 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 PLEKP08567 350 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 CCND2P30279 289 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 CHMP4BP1P59074 171 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 POLR2FP61218 127 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 KRT76Q01546 638 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 COG2Q14746 738 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 ODR4Q5SWX8 454 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 RDM1Q8NG50 284 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 TRPM4Q8TD43 1214 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 FIZ1Q96SL8 496 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 GANQ9H2C0 597 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 NLRC4Q9NPP4 1024 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 LUC7LQ9NQ29 371 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 GGA3Q9NZ52 723 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 PKD2L1Q9P0L9 805 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 TRIM10Q9UDY6 481 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 MYO6Q9UM54 1294 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 SAMM50Q9Y512 469 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 MYPNQ86TC9 1320 aa20.08■□□□□ 0.81
PDLIM7-203ENST00000359895 ANO9A1A5B4 782 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 GTPBP10A4D1E9 387 aaKnown RBP20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 ATP2A1O14983 1001 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 MAFGO15525 162 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 HIP1RO75146 1068 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 AKAP3O75969 853 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 PSMC2P35998 433 aaKnown RBP20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 HMGCS2P54868 508 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 AMPD2Q01433 879 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 TEX35Q5T0J7 233 aa20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 LARSQ9P2J5 1176 aaKnown RBP20.08■□□□□ 0.8
PDLIM7-203ENST00000359895 POTEB2H3BUK9 544 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 ZNF263O14978 683 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 LMNB1P20700 586 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 CYP27A1Q02318 531 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 MYBPC2Q14324 1141 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 ASTE1Q2TB18 679 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 GBP6Q6ZN66 633 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 NLRX1Q86UT6 975 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 C4orf19Q8IY42 314 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 SECISBP2LQ93073 1101 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 GPRASP2Q96D09 838 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 CRACR2AQ9BSW2 395 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 LACRTQ9GZZ8 138 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 GBP3Q9H0R5 595 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 POLD4Q9HCU8 107 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 AIPL1Q9NZN9 384 aa20.07■□□□□ 0.8
PDLIM7-203ENST00000359895 WDR64B1ANS9 1081 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 RBAK-RBAKDNI3L0D1 243 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 CLIC2O15247 247 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 PJA2O43164 708 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 MAPK7Q13164 816 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 BAATQ14032 418 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 EXOC3L4Q17RC7 722 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 ZC2HC1CQ53FD0 456 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 TDRD12Q587J7 1177 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 PAPD7Q5XG87 772 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 HGSNATQ68CP4 663 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 SNRNP48Q6IEG0 339 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 FAM186BQ8IYM0 893 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 CCDC43Q96MW1 224 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 STRA6Q9BX79 667 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 FBXL5Q9UKA1 691 aa20.06■□□□□ 0.8
PDLIM7-203ENST00000359895 RCCD1A6NED2 376 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 TACC1O75410 805 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms