RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 NAA35Q5VZE5 725 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ANKRD40Q6AI12 368 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 C8orf74Q6P047 294 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 NFRKBQ6P4R8 1299 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 C6orf89Q6UWU4 347 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 LRIG3Q6UXM1 1119 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 IQCA1Q86XH1 822 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 BLIDQ8IZY5 108 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 SMCR8Q8TEV9 937 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 PIK3R5Q8WYR1 880 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 RNPC3Q96LT9 517 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 C7orf25Q9BPX7 421 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 C1QTNF2Q9BXJ5 285 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ATRXP46100 2492 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF541Q9H0D2 1346 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 MAGEB6P1A0A0J9YX57 407 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ZNF233A6NK53 670 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 LAD1O00515 517 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 C21orf2O43822 256 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 KIF1CO43896 1103 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ORC4O43929 436 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 MDH1P40925 334 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 MAGEA1P43355 309 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ASTE1Q2TB18 679 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CFAP221Q4G0U5 840 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 PREPLQ4J6C6 727 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 DTHD1Q6ZMT9 781 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 KRT26Q7Z3Y9 468 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 GPATCH11Q8N954 259 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 WHAMMQ8TF30 809 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC43Q96MW1 224 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 TLR10Q9BXR5 811 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 RABEP2Q9H5N1 569 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 ACTR5Q9H9F9 607 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 RBM12Q9NTZ6 932 aaKnown RBP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 DONSONQ9NYP3 566 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
C11orf54-202ENST00000354421 CENPFP49454 3210 aa8.26□□□□□ -1.09
C11orf54-202ENST00000354421 IRS2Q9Y4H2 1338 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 BDP1A6H8Y1 2624 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 SSU72P8A0A1W2PR75 194 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 TMCO5BA8MYB1 307 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 ERVV-1B6SEH8 477 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 M0R2N6 131 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 MYO1FO00160 1098 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 ADAMTS3O15072 1205 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 FKTNO75072 461 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 RASSF9O75901 435 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 STARD3NLO95772 234 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 PLEKP08567 350 aaPredicted RBP8.25□□□□□ -1.09
C11orf54-202ENST00000354421 CCDC172P0C7W6 258 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 MYBP10242 640 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 NR1D1P20393 614 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 BMP8BP34820 402 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 HSPA9P38646 679 aaKnown RBP8.25□□□□□ -1.09
C11orf54-202ENST00000354421 VWA3BQ502W6 1294 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 KLHDC7AQ5VTJ3 777 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 TTC19Q6DKK2 380 aaPredicted RBP8.25□□□□□ -1.09
C11orf54-202ENST00000354421 CENPPQ6IPU0 288 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 PDXDC1Q6P996 788 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 NLRP14Q86W24 1093 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 SH2D3CQ8N5H7 860 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 MIGA1Q8NAN2 632 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 LINC00116Q8NCU8 138 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 MYCBPAPQ8TBZ2 947 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 MAGEC3Q8TD91 643 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 ATP6V1G3Q96LB4 118 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 NOX5Q96PH1 765 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 CCT8L2Q96SF2 557 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 RIOK1Q9BRS2 568 aaKnown RBP8.25□□□□□ -1.09
C11orf54-202ENST00000354421 PLCB1Q9NQ66 1216 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 LRP2BPQ9P2M1 347 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 TRMT112Q9UI30 125 aaKnown RBP8.25□□□□□ -1.09
C11orf54-202ENST00000354421 MCM8Q9UJA3 840 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 PCDHA4Q9UN74 947 aa8.25□□□□□ -1.09
C11orf54-202ENST00000354421 FLT1P17948 1338 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 H0YHG0 523 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 CES2O00748 559 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FGFR1OPO95684 399 aaKnown RBP8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FAM107AO95990 144 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 GLI1P08151 1106 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FAM153BP0C7A2 387 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 FSHRP23945 695 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 UBA7P41226 1012 aa8.24□□□□□ -1.09
C11orf54-202ENST00000354421 CARSP49589 748 aaKnown RBP8.24□□□□□ -1.09
C11orf54-202ENST00000354421 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms