RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 ENC1O14682 589 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 TLR2O60603 784 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 CDK17Q00537 523 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 CCDC170Q8IYT3 715 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 PUF60Q9UHX1 559 aaKnown RBP20.43■□□□□ 0.86
ATRIP-202ENST00000346691 ZNF214Q9UL59 606 aaPredicted RBP20.43■□□□□ 0.86
ATRIP-202ENST00000346691 PCDHB13Q9Y5F0 798 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 CCNE2O96020 404 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 DSG3P32926 999 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 ODR4Q5SWX8 454 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 NIPA1Q7RTP0 329 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 GPC2Q8N158 579 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
ATRIP-202ENST00000346691 ARMCX3Q9UH62 379 aaPredicted RBP20.43■□□□□ 0.86
ATRIP-202ENST00000346691 SLC9A1P19634 815 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 CLCN6P51797 869 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 KIF11P52732 1056 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 ZNF131P52739 623 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 KRT83P78385 493 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 ZNF720Q7Z2F6 126 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 FAM178BQ8IXR5 827 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 UBXN4Q92575 508 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 NAPGQ99747 312 aaPredicted RBP20.42■□□□□ 0.86
ATRIP-202ENST00000346691 HAUS4Q9H6D7 363 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 HDAC6Q9UBN7 1215 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 FHOD1Q9Y613 1164 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 DOCK5Q9H7D0 1870 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 TEX35Q5T0J7 233 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 HGSNATQ68CP4 663 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 KCTD17Q8N5Z5 321 aa20.42■□□□□ 0.86
ATRIP-202ENST00000346691 SBF1O95248 1867 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
ATRIP-202ENST00000346691 MACROD2A1Z1Q3 448 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 SORBS3O60504 671 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 P4HBP07237 508 aaKnown RBP20.41■□□□□ 0.86
ATRIP-202ENST00000346691 LMNB1P20700 586 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 TCERG1LQ5VWI1 586 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 FRMD5Q7Z6J6 570 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 GANQ9H2C0 597 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 CEP72Q9P209 647 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 EFCAB8A8MWE9 144 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 MUTP22033 750 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 ARID5AQ03989 594 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 ENOX2Q16206 610 aaKnown RBP20.41■□□□□ 0.86
ATRIP-202ENST00000346691 DPY19L2P1Q6NXN4 242 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 IQCDQ96DY2 449 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 C12orf42Q96LP6 360 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 CDC23Q9UJX2 597 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 FAM184BQ9ULE4 1060 aa20.41■□□□□ 0.86
ATRIP-202ENST00000346691 WDR90Q96KV7 1748 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 TISP43B9A030 160 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 USO1O60763 962 aaKnown RBP20.4■□□□□ 0.86
ATRIP-202ENST00000346691 USP2O75604 605 aaPredicted RBP20.4■□□□□ 0.86
ATRIP-202ENST00000346691 GFPT1Q06210 699 aaPredicted RBP20.4■□□□□ 0.86
ATRIP-202ENST00000346691 AFG3L2Q9Y4W6 797 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 EIF3DO15371 548 aaKnown RBP eCLIP20.4■□□□□ 0.86
ATRIP-202ENST00000346691 GUCY2CP25092 1073 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 PLA2G4FQ68DD2 849 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 CATSPERGQ6ZRH7 1159 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.4■□□□□ 0.86
ATRIP-202ENST00000346691 DEF6Q9H4E7 631 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 AJAP1Q9UKB5 411 aaPredicted RBP20.4■□□□□ 0.86
ATRIP-202ENST00000346691 ADAMTS5Q9UNA0 930 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 PCDHA13Q9Y5I0 950 aa20.4■□□□□ 0.86
ATRIP-202ENST00000346691 KIAA1217Q5T5P2 1943 aa20.39■□□□□ 0.86
ATRIP-202ENST00000346691 ADM5C9JUS6 153 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 AFPP02771 609 aaKnown RBP20.39■□□□□ 0.85
ATRIP-202ENST00000346691 ATP1A1P05023 1023 aaKnown RBP20.39■□□□□ 0.85
ATRIP-202ENST00000346691 QARSP47897 775 aaKnown RBP20.39■□□□□ 0.85
ATRIP-202ENST00000346691 RARRES1P49788 294 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 CYP2J2P51589 502 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 VAV2P52735 878 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 RSRC2Q7L4I2 434 aaKnown RBP20.39■□□□□ 0.85
ATRIP-202ENST00000346691 UPF1Q92900 1129 aaKnown RBP eCLIP20.39■□□□□ 0.85
ATRIP-202ENST00000346691 SLC35C1Q96A29 364 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 MLXIPQ9HAP2 919 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 GPRC5CQ9NQ84 441 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 MAP3K20Q9NYL2 800 aaKnown RBP20.39■□□□□ 0.85
ATRIP-202ENST00000346691 ODF2LQ9ULJ1 636 aa20.39■□□□□ 0.85
ATRIP-202ENST00000346691 BACH1O14867 736 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 AKR1B10O60218 316 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 RGS20O76081 388 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 IPO7O95373 1038 aaKnown RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 NR3C2P08235 984 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 PNMA6AP0CW24 399 aaPredicted RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 XRCC5P13010 732 aaKnown RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 NPEPPSP55786 919 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 AMPD2Q01433 879 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 RAPGEF1Q13905 1077 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 ASTE1Q2TB18 679 aaPredicted RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 TDRD12Q587J7 1177 aaKnown RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 NEK9Q8TD19 979 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 IFIH1Q9BYX4 1025 aaKnown RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 MYO1AQ9UBC5 1043 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 LOXHD1Q8IVV2 1947 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 ERICH4A6NGS2 130 aa20.38■□□□□ 0.85
ATRIP-202ENST00000346691 SPDYE16A6NNV3 312 aaPredicted RBP20.38■□□□□ 0.85
ATRIP-202ENST00000346691 EPB41P11171 864 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms