RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 PP2D1A8MPX8 630 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 ZBBXA8MT70 800 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 ABL1P00519 1130 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 CNGA1P29973 690 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 EPHB1P54762 984 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 SIK1P57059 783 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 C1orf146Q5VVC0 180 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 RNF207Q6ZRF8 634 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 TRIM56Q9BRZ2 755 aaKnown RBP17.9■□□□□ 0.46
AP3D1-201ENST00000345016 SNX12Q9UMY4 172 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 SNAP23O00161 211 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 MDM2Q00987 491 aaPredicted RBP17.9■□□□□ 0.46
AP3D1-201ENST00000345016 PRPSAP1Q14558 356 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 HACE1Q8IYU2 909 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 CCT8L2Q96SF2 557 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 ECT2Q9H8V3 914 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 LIMA1Q9UHB6 759 aaKnown RBP17.9■□□□□ 0.46
AP3D1-201ENST00000345016 ATP10AO60312 1499 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 A0A1W2PQC6 194 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 ARL4AP40617 200 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 GPC5P78333 572 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 CDR2Q01850 454 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 TXNRD1Q16881 649 aa17.9■□□□□ 0.46
AP3D1-201ENST00000345016 TMEM259Q4ZIN3 620 aa17.89■□□□□ 0.46
AP3D1-201ENST00000345016 NUDCD1Q96RS6 583 aa17.89■□□□□ 0.46
AP3D1-201ENST00000345016 MXD3Q9BW11 206 aa17.89■□□□□ 0.46
AP3D1-201ENST00000345016 GRID2IPA4D2P6 1211 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 WDR64B1ANS9 1081 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 IGBP1P78318 339 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 SLC12A1Q13621 1099 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 PDCD2Q16342 344 aaPredicted RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 PFKFB3Q16875 520 aaPredicted RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 TMTC4Q5T4D3 741 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 OR6B2Q6IFH4 312 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 C7orf31Q8N865 590 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 PIGOQ8TEQ8 1089 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 ATP6V1E2Q96A05 226 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 UPF3AQ9H1J1 476 aaKnown RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 VIPAS39Q9H9C1 493 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 LY9Q9HBG7 655 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 ADAM22Q9P0K1 906 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 CREB3O43889 395 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 PRPSAP2O60256 369 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 BMP3P12645 472 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 EEF1DP29692 281 aaKnown RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 MDH1P40925 334 aaKnown RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 ARL4CP56559 192 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 NR1H3Q13133 447 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 PLCB4Q15147 1175 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 CDC37Q16543 378 aaPredicted RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 SFR1Q86XK3 245 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 LEMD3Q9Y2U8 911 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 NUB1Q9Y5A7 615 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 NR3C1P04150 777 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 KRT10P13645 584 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 KRT82Q9NSB4 513 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 IPO11Q9UI26 975 aaKnown RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 CAPN11Q9UMQ6 739 aa17.89■□□□□ 0.45
AP3D1-201ENST00000345016 NOC2LQ9Y3T9 749 aaKnown RBP17.89■□□□□ 0.45
AP3D1-201ENST00000345016 M0QZ92 97 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 PFDN6O15212 129 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 TJP3O95049 919 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 MECOMQ03112 1051 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 FGD4Q96M96 766 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 GGT7Q9UJ14 662 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 XDHP47989 1333 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 RPAP1Q9BWH6 1393 aaPredicted RBP17.88■□□□□ 0.45
AP3D1-201ENST00000345016 GDF11O95390 407 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.458e-6■■■□□ 16.6
AP3D1-201ENST00000345016 C4orf50Q6ZRC1 276 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 RAB44Q7Z6P3 723 aaPredicted RBP17.88■□□□□ 0.45
AP3D1-201ENST00000345016 DEPDC1BQ8WUY9 529 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 ANKRD36BP1Q96IX9 119 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 FAM161BQ96MY7 647 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 SLC38A10Q9HBR0 1119 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 APOBEC2Q9Y235 224 aaKnown RBP17.88■□□□□ 0.45
AP3D1-201ENST00000345016 GOLGA8MH3BSY2 632 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 EIF3HO15372 352 aaKnown RBP eCLIP17.88■□□□□ 0.455e-7■□□□□ 9.1
AP3D1-201ENST00000345016 HP1BP3Q5SSJ5 553 aaPredicted RBP17.88■□□□□ 0.45
AP3D1-201ENST00000345016 SLITRK6Q9H5Y7 841 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 ZWILCHQ9H900 591 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 SH3GLB2Q9NR46 395 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 E9PMD0 336 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 HOXA13P31271 388 aaPredicted RBP17.88■□□□□ 0.45
AP3D1-201ENST00000345016 PDE6BP35913 854 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 GCLMP48507 274 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 STAG2Q8N3U4 1231 aa17.88■□□□□ 0.45
AP3D1-201ENST00000345016 ENAHQ8N8S7 591 aaPredicted RBP17.88■□□□□ 0.45
AP3D1-201ENST00000345016 PNMA6FA0A0J9YX94 578 aa17.87■□□□□ 0.45
AP3D1-201ENST00000345016 HSPA4LO95757 839 aa17.87■□□□□ 0.45
AP3D1-201ENST00000345016 INPP1P49441 399 aa17.87■□□□□ 0.45
AP3D1-201ENST00000345016 OCRLQ01968 901 aa17.87■□□□□ 0.45
AP3D1-201ENST00000345016 FMR1Q06787 632 aaKnown RBP eCLIP17.87■□□□□ 0.457e-7■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms