RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 NAALADL2Q58DX5 795 aa27.73■■■□□ 2.03
CDKN3-202ENST00000335183 PDXDC2PQ6P474 469 aa27.73■■■□□ 2.03
CDKN3-202ENST00000335183 NIPA1Q7RTP0 329 aa27.73■■■□□ 2.03
CDKN3-202ENST00000335183 SPPL3Q8TCT6 385 aa27.73■■■□□ 2.03
CDKN3-202ENST00000335183 C19orf67A6NJJ6 358 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 RPS6KA5O75582 802 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 HOXD11P31277 338 aaPredicted RBP27.72■■■□□ 2.03
CDKN3-202ENST00000335183 NDUFV1P49821 464 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 KRT32Q14532 448 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 TSGA10IPQ3SY00 556 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 SWSAP1Q6NVH7 229 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 MIS18BP1Q6P0N0 1132 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 POF1BQ8WVV4 589 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 PPP1R16BQ96T49 567 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 CDHR5Q9HBB8 845 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 CD207Q9UJ71 328 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 NOC2LQ9Y3T9 749 aaKnown RBP27.72■■■□□ 2.03
CDKN3-202ENST00000335183 PCDHB7Q9Y5E2 793 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 COL1A2P08123 1366 aa27.72■■■□□ 2.03
CDKN3-202ENST00000335183 MGEA5O60502 916 aa27.71■■■□□ 2.03
CDKN3-202ENST00000335183 IRS1P35568 1242 aa27.71■■■□□ 2.03
CDKN3-202ENST00000335183 SARSP49591 514 aaKnown RBP27.71■■■□□ 2.03
CDKN3-202ENST00000335183 METAP2P50579 478 aaKnown RBP eCLIP27.71■■■□□ 2.03
CDKN3-202ENST00000335183 ADAM15Q13444 863 aa27.71■■■□□ 2.03
CDKN3-202ENST00000335183 SMAD4Q13485 552 aaKnown RBP27.71■■■□□ 2.03
CDKN3-202ENST00000335183 SPOUT1Q5T280 376 aaKnown RBP27.71■■■□□ 2.03
CDKN3-202ENST00000335183 ADGRD2Q7Z7M1 963 aa27.71■■■□□ 2.03
CDKN3-202ENST00000335183 CKAP2LQ8IYA6 745 aa27.71■■■□□ 2.03
CDKN3-202ENST00000335183 ERVK-5Q9HDB9 667 aa27.71■■■□□ 2.03
CDKN3-202ENST00000335183 DENND3A2RUS2 1198 aa27.7■■■□□ 2.02
CDKN3-202ENST00000335183 IPO5O00410 1097 aaKnown RBP27.7■■■□□ 2.02
CDKN3-202ENST00000335183 ADD1P35611 737 aaKnown RBP27.7■■■□□ 2.02
CDKN3-202ENST00000335183 PFKFB3Q16875 520 aaPredicted RBP27.7■■■□□ 2.02
CDKN3-202ENST00000335183 ZNF484Q5JVG2 852 aa27.7■■■□□ 2.02
CDKN3-202ENST00000335183 TRMT1LQ7Z2T5 733 aaKnown RBP27.7■■■□□ 2.02
CDKN3-202ENST00000335183 KIAA0319LQ8IZA0 1049 aa27.7■■■□□ 2.02
CDKN3-202ENST00000335183 TMEM40Q8WWA1 233 aa27.7■■■□□ 2.02
CDKN3-202ENST00000335183 ZNF577Q9BSK1 485 aa27.7■■■□□ 2.02
CDKN3-202ENST00000335183 UPF3BQ9BZI7 483 aaKnown RBP27.7■■■□□ 2.02
CDKN3-202ENST00000335183 IGLV3-22A0A075B6J6 115 aa27.69■■■□□ 2.02
CDKN3-202ENST00000335183 DHX15O43143 795 aaKnown RBP27.69■■■□□ 2.02
CDKN3-202ENST00000335183 PPFIA3O75145 1194 aa27.69■■■□□ 2.02
CDKN3-202ENST00000335183 CPA1P15085 419 aa27.69■■■□□ 2.02
CDKN3-202ENST00000335183 RCAN1P53805 252 aa27.69■■■□□ 2.02
CDKN3-202ENST00000335183 POP1Q99575 1024 aaKnown RBP27.69■■■□□ 2.02
CDKN3-202ENST00000335183 ADAM2Q99965 735 aa27.69■■■□□ 2.02
CDKN3-202ENST00000335183 CDC45O75419 566 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 CYP3A4P08684 503 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 HMGB1P09429 215 aaKnown RBP27.68■■■□□ 2.02
CDKN3-202ENST00000335183 ATP4AP20648 1035 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 NRIP1P48552 1158 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 APOBRQ0VD83 1088 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 ODR4Q5SWX8 454 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 RBM23Q86U06 439 aaKnown RBP27.68■■■□□ 2.02
CDKN3-202ENST00000335183 OSMRQ99650 979 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 TCEAL9Q9UHQ7 104 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 ST3GAL5Q9UNP4 418 aa27.68■■■□□ 2.02
CDKN3-202ENST00000335183 CCDC196A0A1B0GTZ2 297 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 TBKBP1A7MCY6 615 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 ZBTB42B2RXF5 422 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 ADAMTS3O15072 1205 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 KIZQ2M2Z5 673 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 CRYGNQ8WXF5 182 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 C6orf50Q9HD87 102 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 RGS18Q9NS28 235 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 C1orf112Q9NSG2 853 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 TBC1D22BQ9NU19 505 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 PCDHB12Q9Y5F1 795 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 PCDHGC5Q9Y5F6 944 aa27.67■■■□□ 2.02
CDKN3-202ENST00000335183 GPR182O15218 404 aa27.66■■■□□ 2.02
CDKN3-202ENST00000335183 SETQ01105 290 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-202ENST00000335183 FAM102BQ5T8I3 360 aa27.66■■■□□ 2.02
CDKN3-202ENST00000335183 Q6ZUG5 572 aa27.66■■■□□ 2.02
CDKN3-202ENST00000335183 CENPQQ7L2Z9 268 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-202ENST00000335183 REXO1Q8N1G1 1221 aaKnown RBP27.66■■■□□ 2.02
CDKN3-202ENST00000335183 METTL13Q8N6R0 699 aa27.66■■■□□ 2.02
CDKN3-202ENST00000335183 EFHBQ8N7U6 833 aa27.66■■■□□ 2.02
CDKN3-202ENST00000335183 CCDC12Q8WUD4 166 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-202ENST00000335183 BBXQ8WY36 941 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-202ENST00000335183 ZMYND12Q9H0C1 365 aa27.66■■■□□ 2.02
CDKN3-202ENST00000335183 RNF216Q9NWF9 866 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-202ENST00000335183 ESYT2A0FGR8 921 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 C22orf31O95567 290 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 VTNP04004 478 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 ZNF746Q6NUN9 644 aaPredicted RBP27.65■■■□□ 2.02
CDKN3-202ENST00000335183 SLC24A5Q71RS6 500 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 MICAL1Q8TDZ2 1067 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 BRF1Q92994 677 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 MSLNLQ96KJ4 702 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 AAASQ9NRG9 546 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 MUTYHQ9UIF7 546 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 MUC6Q6W4X9 2439 aa27.65■■■□□ 2.02
CDKN3-202ENST00000335183 PSAPP07602 524 aa27.64■■■□□ 2.02
CDKN3-202ENST00000335183 CRYBB1P53674 252 aaPredicted RBP27.64■■■□□ 2.02
CDKN3-202ENST00000335183 PRR16Q569H4 304 aa27.64■■■□□ 2.02
CDKN3-202ENST00000335183 MCTP2Q6DN12 878 aa27.64■■■□□ 2.02
CDKN3-202ENST00000335183 FAM228AQ86W67 206 aa27.64■■■□□ 2.02
CDKN3-202ENST00000335183 CLEC1BQ9P126 229 aa27.64■■■□□ 2.02
CDKN3-202ENST00000335183 GABBR1Q9UBS5 961 aa27.64■■■□□ 2.02
CDKN3-202ENST00000335183 BARX2Q9UMQ3 279 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 613.8 ms