RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 SNX29Q8TEQ0 813 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 THOC1Q96FV9 657 aaKnown RBP17.69■□□□□ 0.42
UPK3B-202ENST00000334348 NUDT12Q9BQG2 462 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 SLC24A3Q9HC58 644 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 NENFQ9UMX5 172 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 KIAA1551Q9HCM1 1747 aa17.69■□□□□ 0.42
UPK3B-202ENST00000334348 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 FLOT1O75955 427 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 NPEPPSP55786 919 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 DPY19L2P1Q6NXN4 242 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 ZC3H3Q8IXZ2 948 aaKnown RBP17.68■□□□□ 0.42
UPK3B-202ENST00000334348 HES6Q96HZ4 224 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 SELENOSQ9BQE4 189 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
UPK3B-202ENST00000334348 LRRC4BQ9NT99 713 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 PANK4Q9NVE7 773 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 SHBGP04278 402 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 GOLGA8HP0CJ92 632 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 PRKCIP41743 596 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
UPK3B-202ENST00000334348 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 SPAG5Q96R06 1193 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 ELAC2Q9BQ52 826 aaKnown RBP17.68■□□□□ 0.42
UPK3B-202ENST00000334348 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 ZDHHC18Q9NUE0 388 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
UPK3B-202ENST00000334348 INTUQ9ULD6 942 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 MTMR7Q9Y216 660 aa17.68■□□□□ 0.42
UPK3B-202ENST00000334348 POTEMA6NI47 508 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 NTSR2O95665 410 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 PPP2R5EQ16537 467 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 DUPD1Q68J44 220 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 CEP120Q8N960 986 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 NEK9Q8TD19 979 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 AGAP11Q8TF27 550 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 TRIM51Q9BSJ1 452 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 INTS9Q9NV88 658 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 NOP53Q9NZM5 478 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 TRPC6Q9Y210 931 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 L3MBTL1Q9Y468 752 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 H2AFZP0C0S5 128 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 TSPY3P0CV98 308 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 TSPY8P0CW00 308 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 NQO1P15559 274 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 PMS2P54278 862 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 SIK1P57059 783 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 ITPK1Q13572 414 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 C11orf91Q3C1V1 193 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 FAM133BQ5BKY9 247 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 H2AFVQ71UI9 128 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 BZW1Q7L1Q6 419 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 NSRP1Q9H0G5 558 aaKnown RBP17.67■□□□□ 0.42
UPK3B-202ENST00000334348 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
UPK3B-202ENST00000334348 ESYT2A0FGR8 921 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 SLC37A4O43826 429 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 ACTN1P12814 892 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 UCHL3P15374 230 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 PTENP60484 403 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 DENND2CQ68D51 928 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 DAAM2Q86T65 1068 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 DNAAF5Q86Y56 855 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 ERP44Q9BS26 406 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 TRIM31Q9BZY9 425 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 KCTD10Q9H3F6 313 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 AGTP01019 485 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 FGGP02679 453 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 CCNHP51946 323 aaPredicted RBP17.66■□□□□ 0.42
UPK3B-202ENST00000334348 ADAM9Q13443 819 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 CROCCP2Q86T23 111 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
UPK3B-202ENST00000334348 NELFCDQ8IXH7 590 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 ARMC2Q8NEN0 867 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 FGFBP2Q9BYJ0 223 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 CPVLQ9H3G5 476 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 BMP2KQ9NSY1 1161 aaPredicted RBP17.66■□□□□ 0.42
UPK3B-202ENST00000334348 TMEM260Q9NX78 707 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 AMFRQ9UKV5 643 aa17.66■□□□□ 0.42
UPK3B-202ENST00000334348 DIS3Q9Y2L1 958 aaKnown RBP17.66■□□□□ 0.42
UPK3B-202ENST00000334348 RGS16O15492 202 aaPredicted RBP17.65■□□□□ 0.42
UPK3B-202ENST00000334348 KLRC3Q07444 240 aa17.65■□□□□ 0.42
UPK3B-202ENST00000334348 C6orf118Q5T5N4 469 aa17.65■□□□□ 0.42
UPK3B-202ENST00000334348 RNF25Q96BH1 459 aaPredicted RBP17.65■□□□□ 0.42
UPK3B-202ENST00000334348 PRMT1Q99873 361 aaKnown RBP17.65■□□□□ 0.42
UPK3B-202ENST00000334348 BSDC1Q9NW68 430 aaPredicted RBP17.65■□□□□ 0.42
UPK3B-202ENST00000334348 SEC63Q9UGP8 760 aaKnown RBP17.65■□□□□ 0.42
UPK3B-202ENST00000334348 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
UPK3B-202ENST00000334348 DAAM1Q9Y4D1 1078 aa17.65■□□□□ 0.42
UPK3B-202ENST00000334348 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
UPK3B-202ENST00000334348 FAM187AA6NFU0 413 aa17.65■□□□□ 0.42
UPK3B-202ENST00000334348 VIMP08670 466 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms