RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 IFFO1Q0D2I5 559 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 POTEBQ6S5H4 581 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 CHMP6Q96FZ7 201 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 XPO6Q96QU8 1125 aaKnown RBP18.22■□□□□ 0.51
SSH1-201ENST00000326470 FMO2Q99518 471 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 DPH5Q9H2P9 285 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 DONSONQ9NYP3 566 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 TPX2Q9ULW0 747 aaKnown RBP18.22■□□□□ 0.51
SSH1-201ENST00000326470 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 F8W031 263 aaPredicted RBP18.21■□□□□ 0.51
SSH1-201ENST00000326470 SNHG28P0DPA3 235 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 TM4SF1P30408 202 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 JAM2P57087 298 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 EPHA7Q15375 998 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 ARSHQ5FYA8 562 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 HVCN1Q96D96 273 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 LRRC4CQ9HCJ2 640 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 GPR75-ASB3A0A0A6YYF3 556 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 DDX3XO00571 662 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSH1-201ENST00000326470 KRT18P05783 430 aaKnown RBP18.21■□□□□ 0.51
SSH1-201ENST00000326470 XRCC5P13010 732 aaKnown RBP18.21■□□□□ 0.51
SSH1-201ENST00000326470 ELF1P32519 619 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 NF2P35240 595 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 SLC12A3P55017 1021 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 KCTD19Q17RG1 926 aaPredicted RBP18.21■□□□□ 0.51
SSH1-201ENST00000326470 NBPF5PQ86XG9 351 aaPredicted RBP18.21■□□□□ 0.51
SSH1-201ENST00000326470 ATP8B4Q8TF62 1192 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 CUL5Q93034 780 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 FAM129AQ9BZQ8 928 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 RAB17Q9H0T7 212 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 ODF2LQ9ULJ1 636 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 ATP8A1Q9Y2Q0 1164 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 MYH7BA7E2Y1 1941 aa18.21■□□□□ 0.51
SSH1-201ENST00000326470 KIF13BQ9NQT8 1826 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 CASP5P51878 434 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 MRPL12P52815 198 aaKnown RBP18.2■□□□□ 0.5
SSH1-201ENST00000326470 KNOP1Q1ED39 458 aaKnown RBP18.2■□□□□ 0.5
SSH1-201ENST00000326470 HOOK3Q86VS8 718 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 MDM1Q8TC05 714 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 ZHX3Q9H4I2 956 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 JMJD4Q9H9V9 463 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 ANKIB1Q9P2G1 1089 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 KIF1CO43896 1103 aaKnown RBP18.2■□□□□ 0.5
SSH1-201ENST00000326470 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
SSH1-201ENST00000326470 FGGP02679 453 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 MMP14P50281 582 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 CEP57Q86XR8 500 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 NAP1L4Q99733 375 aaKnown RBP18.2■□□□□ 0.5
SSH1-201ENST00000326470 TRIM51Q9BSJ1 452 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 GPCPD1Q9NPB8 672 aa18.2■□□□□ 0.5
SSH1-201ENST00000326470 MGRN1O60291 552 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 CTNND1O60716 968 aaKnown RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 CAND2O75155 1236 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 NUDT17P0C025 328 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 PTENP60484 403 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 PPP2R5EQ16537 467 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 CCDC24Q8N4L8 307 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 U2AF1L4Q8WU68 220 aaKnown RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 AJAP1Q9UKB5 411 aaPredicted RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 PNMA2Q9UL42 364 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 PLIN4Q96Q06 1357 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 COL5A3P25940 1745 aaPredicted RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 AKAP3O75969 853 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 TRIM37O94972 964 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 PLCG2P16885 1265 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 HOXD13P35453 343 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 GALCP54803 685 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 ADGRF4Q8IZF3 695 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 CCDC197Q8NCU1 140 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 ZNF317Q96PQ6 595 aaPredicted RBP18.19■□□□□ 0.5
SSH1-201ENST00000326470 MXD3Q9BW11 206 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 TRIM31Q9BZY9 425 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 NR2E1Q9Y466 385 aa18.19■□□□□ 0.5
SSH1-201ENST00000326470 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 CCT8L1PA6NM43 557 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 PDXKO00764 312 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 CALUO43852 315 aaPredicted RBP18.18■□□□□ 0.5
SSH1-201ENST00000326470 ATP2C2O75185 946 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 MED24O75448 989 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 GFPT2O94808 682 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 SLC8A1P32418 973 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 NBPF9Q3BBW0 867 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 DCAF17Q5H9S7 520 aaPredicted RBP18.18■□□□□ 0.5
SSH1-201ENST00000326470 DUPD1Q68J44 220 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 EPM2AIP1Q7L775 607 aaPredicted RBP18.18■□□□□ 0.5
SSH1-201ENST00000326470 ZNF804AQ7Z570 1209 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 SCLT1Q96NL6 688 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 EPB41L4BQ9H329 900 aa18.18■□□□□ 0.5
SSH1-201ENST00000326470 METTL14Q9HCE5 456 aaKnown RBP18.18■□□□□ 0.5
SSH1-201ENST00000326470 KCNMB3Q9NPA1 279 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms