RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 SNX29Q8TEQ0 813 aa13.3□□□□□ -0.28
SEC24A-201ENST00000322887 SART1O43290 800 aaKnown RBP13.29□□□□□ -0.28
SEC24A-201ENST00000322887 GRM4Q14833 912 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEC24A-201ENST00000322887 DLGAP5Q15398 846 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 CYB5D1Q6P9G0 228 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 CCDC121Q6ZUS5 278 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 ZNF571Q7Z3V5 609 aaPredicted RBP13.29□□□□□ -0.28
SEC24A-201ENST00000322887 NEK8Q86SG6 692 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 CDK5RAP3Q96JB5 506 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 SEC16BQ96JE7 1060 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 SLC12A6Q9UHW9 1150 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 TLDC2A0PJX2 215 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
SEC24A-201ENST00000322887 MYZAPP0CAP1 466 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 PAX7P23759 505 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 CASP5P51878 434 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 ITIH3Q06033 890 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 SLC30A10Q6XR72 485 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
SEC24A-201ENST00000322887 CALML4Q96GE6 196 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 IDI2Q9BXS1 227 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 TAF1DQ9H5J8 278 aaPredicted RBP13.29□□□□□ -0.28
SEC24A-201ENST00000322887 ATP8A2Q9NTI2 1148 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 PNMA2Q9UL42 364 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 ATP8A1Q9Y2Q0 1164 aa13.29□□□□□ -0.28
SEC24A-201ENST00000322887 GMNCA6NCL1 334 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 CCDC172P0C7W6 258 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 TNNI2P48788 182 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 ZNF211Q13398 564 aaPredicted RBP13.28□□□□□ -0.28
SEC24A-201ENST00000322887 CALCRLQ16602 461 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 ADARB2Q9NS39 739 aaKnown RBP13.28□□□□□ -0.28
SEC24A-201ENST00000322887 NOC2LQ9Y3T9 749 aaKnown RBP13.28□□□□□ -0.28
SEC24A-201ENST00000322887 SCN4AP35499 1836 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 UPP2O95045 317 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
SEC24A-201ENST00000322887 STAT3P40763 770 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 SLCO1A2P46721 670 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 COASYQ13057 564 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 PRPF4BQ13523 1007 aaKnown RBP13.28□□□□□ -0.28
SEC24A-201ENST00000322887 ANKRD20A8PQ5CZ79 823 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 UNC13DQ70J99 1090 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 GIMAP7Q8NHV1 300 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 OSGEPQ9NPF4 335 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 COL2A1P02458 1487 aaPredicted RBP13.28□□□□□ -0.28
SEC24A-201ENST00000322887 UTRNP46939 3433 aa13.28□□□□□ -0.28
SEC24A-201ENST00000322887 TNFRSF8P28908 595 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 HSPA9P38646 679 aaKnown RBP13.27□□□□□ -0.28
SEC24A-201ENST00000322887 SCTRP47872 440 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 SETQ01105 290 aaPredicted RBP13.27□□□□□ -0.28
SEC24A-201ENST00000322887 RPS6KA1Q15418 735 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 KRT71Q3SY84 523 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 CCDC38Q502W7 563 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 CDC42EP5Q6NZY7 148 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.28
SEC24A-201ENST00000322887 ANKS1AQ92625 1134 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.28
SEC24A-201ENST00000322887 MCM8Q9UJA3 840 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 L3MBTL1Q9Y468 752 aa13.27□□□□□ -0.28
SEC24A-201ENST00000322887 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 WNT10BO00744 389 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 CAND2O75155 1236 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 RDXP35241 583 aaKnown RBP13.27□□□□□ -0.29
SEC24A-201ENST00000322887 IFNAR2P48551 515 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 SLC18A3Q16572 532 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 C12orf60Q5U649 245 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 PARP9Q8IXQ6 854 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 LRRC47Q8N1G4 583 aaKnown RBP13.27□□□□□ -0.29
SEC24A-201ENST00000322887 GLG1Q92896 1179 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 MLXIPLQ9NP71 852 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC24A-201ENST00000322887 HACL1Q9UJ83 578 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 ODF2LQ9ULJ1 636 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 COL4A3BPQ9Y5P4 624 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 PCNTO95613 3336 aa13.27□□□□□ -0.29
SEC24A-201ENST00000322887 MEIS1O00470 390 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 KRIT1O00522 736 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 TRAPPC3O43617 180 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 KIF4AO95239 1232 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 SERPING1P05155 500 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 RBM5P52756 815 aaKnown RBP eCLIP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 SMTNP53814 917 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 FAM133BQ5BKY9 247 aaKnown RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 MYH7BA7E2Y1 1941 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 PALM3A6NDB9 673 aaPredicted RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 HMGB1P1B2RPK0 211 aaPredicted RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 CHUKO15111 745 aa13.26□□□□□ -0.29
SEC24A-201ENST00000322887 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
SEC24A-201ENST00000322887 RAD54LQ92698 747 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms