RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
VAMP2-201ENST00000316509 HOXC10Q9NYD6 342 aa15.31■□□□□ 0.04
VAMP2-201ENST00000316509 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
VAMP2-201ENST00000316509 PCDHA13Q9Y5I0 950 aa15.31■□□□□ 0.04
VAMP2-201ENST00000316509 ASTN1O14525 1302 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 EPHB6O15197 1021 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 TGFB1I1O43294 461 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 CCND2P30279 289 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 EIF4A3P38919 411 aaKnown RBP15.3■□□□□ 0.04
VAMP2-201ENST00000316509 KIF11P52732 1056 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 ASTE1Q2TB18 679 aaPredicted RBP15.3■□□□□ 0.04
VAMP2-201ENST00000316509 ARHGEF16Q5VV41 709 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 FMNL3Q8IVF7 1028 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 REPS2Q8NFH8 660 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 KLRG1Q96E93 195 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 RPGRIP1Q96KN7 1286 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 FIZ1Q96SL8 496 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 STRA6Q9BX79 667 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 TMEM206Q9H813 350 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 ANKEF1Q9NU02 776 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 TMOD4Q9NZQ9 345 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.3■□□□□ 0.04
VAMP2-201ENST00000316509 V9GYY5 206 aaPredicted RBP15.3■□□□□ 0.04
VAMP2-201ENST00000316509 ASTN2O75129 1339 aaPredicted RBP15.3■□□□□ 0.04
VAMP2-201ENST00000316509 ZNF541Q9H0D2 1346 aa15.3■□□□□ 0.04
VAMP2-201ENST00000316509 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 C10orf76Q5T2E6 689 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 PADI6Q6TGC4 694 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 CATSPERGQ6ZRH7 1159 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
VAMP2-201ENST00000316509 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
VAMP2-201ENST00000316509 CDHR1Q96JP9 859 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 ST6GALNAC4Q9H4F1 302 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 DMAC2Q9NW81 257 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 TACC1O75410 805 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 LMNB1P20700 586 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 PSMC5P62195 406 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 AMPD2Q01433 879 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 PPP2R5AQ15172 486 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 ODR4Q5SWX8 454 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 ZNF746Q6NUN9 644 aaPredicted RBP15.29■□□□□ 0.04
VAMP2-201ENST00000316509 FBXO38Q6PIJ6 1188 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 GBP6Q6ZN66 633 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 VSIG10LQ86VR7 867 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 SECISBP2LQ93073 1101 aaKnown RBP15.29■□□□□ 0.04
VAMP2-201ENST00000316509 ATG4CQ96DT6 458 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 BORCS6Q96GS4 357 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
VAMP2-201ENST00000316509 GBP3Q9H0R5 595 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 GANQ9H2C0 597 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
VAMP2-201ENST00000316509 WDR64B1ANS9 1081 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 AKAP3O75969 853 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 PRLRP16471 622 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 MAGEA1P43355 309 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 POLR2FP61218 127 aaKnown RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 ITGB3BPQ13352 177 aaPredicted RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 EXOC3L4Q17RC7 722 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 HGSNATQ68CP4 663 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 LRRN4CLQ8ND94 238 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 IL31RAQ8NI17 732 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 DDX41Q9UJV9 622 aaKnown RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 CTAGE15A4D2H0 777 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 HIP1RO75146 1068 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 PPP1R37O75864 691 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 ABL1P00519 1130 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 CTAGE8P0CG41 777 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 NMT1P30419 496 aaKnown RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 CTAGE6Q86UF2 777 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 CTAGE4Q8IX94 777 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 C12orf56Q8IXR9 622 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
VAMP2-201ENST00000316509 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 SAR1BQ9Y6B6 198 aa15.28■□□□□ 0.04
VAMP2-201ENST00000316509 SFI1A8K8P3 1242 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 EIF2AK2P19525 551 aaKnown RBP15.27■□□□□ 0.04
VAMP2-201ENST00000316509 RARRES1P49788 294 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 CKAP4Q07065 602 aaKnown RBP15.27■□□□□ 0.04
VAMP2-201ENST00000316509 MAPK7Q13164 816 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 BAATQ14032 418 aaPredicted RBP15.27■□□□□ 0.04
VAMP2-201ENST00000316509 BMS1Q14692 1282 aaKnown RBP15.27■□□□□ 0.04
VAMP2-201ENST00000316509 ASIC2Q16515 512 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 FAM186BQ8IYM0 893 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
VAMP2-201ENST00000316509 VTI1AQ96AJ9 217 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 DRC1Q96MC2 740 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 ATP8B3O60423 1300 aa15.27■□□□□ 0.04
VAMP2-201ENST00000316509 RBBP6Q7Z6E9 1792 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms